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Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank25Aligned Residues431
% Identity20%Templatec3czkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sucrose hydrolase; PDBTitle: crystal structure analysis of sucrose hydrolase(suh) e322q-2 sucrose complex
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.........270.........280.........290....... ..300.........310.
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Query Sequence  RKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGS. WGYQPTGLYAPTRR
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Template Sequence  RHAGWFGQPHMLGYSAYADRFA. . . . . . . . GTLQGVAERV. PYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPS
Template Known Secondary structure  S
TTGGGSTT


........SST.T
S



SS

TTTTS
TT
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   81........90.........100.. .......110.. .......120.........130.........140.........150.
 
   312.......320.........330.........340.........350. .....
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Query Sequence  FGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGTNL
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Template Sequence  LGSNDDLVALTSRLREAGISLCADFVLNHTADDHAWAQAARAGDARYLDYYHHFADRTVPDRYEATLGQVFPHTAPGNFT
Template Known Secondary structure  T

TT



STTSTT
TTB
SSS


SBTTTB

S
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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   357..360.........370 .........380.........390.........400.........410.........420.........430.....
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Query Sequence  YEHSDPREGYHQDW. NTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEA
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Template Sequence  WVDDTAQWMWTTFYPYQWDLNWSNPAVFGDMALAMLRLA. NLGVEAFRLDSTAYL. . . . . . . . . . . WKRIGTDCMNQSEA
Template Known Secondary structure  TTTT
SSSTTB
TTS.TT

TTTTSS...........


TTS
SSS
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   232.......240.........250.........260.........270 .........280..... ....290.........
 
   436...440.........450.........460.........470.. .......480.........490.........500.........510..
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Query Sequence  IEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDM. . . GGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGIL
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Template Sequence  HTLLVALRAVTDIVAPAVVMKAQAIVPMTQLPPYFGSGVDEGHECHLAYHSTLMAAGWSALALQRGDILHNVIAHS. PPL
Template Known Secondary structure 
TT





GGGSGGGG

GGGTTSS
S
T
TTS.


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   300.........310.........320.........330.........340.........350.........360.........370..... ...
 
   513......520.........530.........540..
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Query Sequence  YNYTENFVLPLSHDEVVHGKKSILDRMPGD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PRHCAWLSYVRCHDDIGWNVLQHEACGNAAQPPFSLRDVARFYANAVPGSYARGESFQGVHGTNGMAAALAGIQAAQEAG
Template Known Secondary structure 
TT
S

SS
GGGGT

SSS



T
STT










TTTT
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   379380.........390.........400.........410.........420.........430.........440.........450........
 
   543......550.........560.........570....... ..580.........590. ........600.
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Query Sequence  . . . . AWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGRE. . . . . . . . . . . . . . WNHDASLDWHLLEG. . . GDNWHHGVQR
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Template Sequence  DAAALAVAVDRLVLLYAIALAMPGVPLIYMGDELAMVNDPGYRDDPHRQHEGRWLHRPAMDWQLAAQRHDAKSLSGTVYR
Template Known Secondary structure 
SSTTGGGT



GGGGG
TTTTT
GGGGG




TTS
TTS
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   463......470.........480.........490.........500.........510.........520.........530.........540..
 
   602.......610.........620.........630.........640.........650.........660.........670.........680.
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Query Sequence  LVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNT
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Template Sequence  RLRGLIRQRAALGALAADQAL. . . . . . ASIALNDPRVFALTR. . . . GDSFIALHNFSDQLLD. VELAAIGVDGWTLLRGD
Template Known Secondary structure  T
GGGSTTS
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S
TT....TTT
SSS
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GGGTT







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   543......550.........560... ......570........ .580.........590.... .....600.........610.
 
   682.......690.........700.........710.........720.....
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Query Sequence  DSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVR
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Template Sequence  G. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SIVLPPYGVRWLQR
Template Known Secondary structure  S.............................

TT

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   623 ......630.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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