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Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank32Aligned Residues453
% Identity18%Templatec2ze0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-glucosidase; PDBTitle: alpha-glucosidase gsj
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  ANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTR
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Template Sequence  KKTWWKEGVAYQIYPRSFM. DANGDGIGDLRGIIEKL. DYLVELGVDIVWICPIYRSPNAD. NGYDISDYYAIMDEFGTM
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GGGT
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SSSSSS

T.T







TT.TT
S
S
GGG

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   2.......10.........20 .........30....... ..40.........50.........60 .........70........
 
   316...320.........330.........340......... 350.........360.........
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Query Sequence  DDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALA. . . . . . EFDGTNLYEHSDPREGYHQD. . . . . . . . . . . . . . . . . . . .
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Template Sequence  DDFDELLAQAHRRGLKVILDLVINHTSDEHPWFIESRSSRDNPKRDWYIWRDGKDGREPNNWESIFGGSAWQYDERTGQY
Template Known Secondary structure  TT

SB

TTS
SSSTTGGGB


BTTB
SS

TTSSBSTTTT
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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   370.........380.........390.........400.........410. ........420.........430.........440..
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Query Sequence  . . . . . . WNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMI. YRDYSRKEGEWIPNEFGGRENLEAIEFLRNT
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Template Sequence  YLHIFDVKQPDLNWENSEVRQALYEMVNWWL. DKGIDGFRIDAISHIKKKPGLPDLPLKYVPSFAGHMNQPGIMEYLREL
Template Known Secondary structure 
SS
TT

BB
TT
.T

SGGGSS

TT






S
SS
TT
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   159160.........170.........180......... 190.........200.........210.........220.........230.......
 
   443......450.........460.........470.........480.........490.........500.........510.........520..
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Query Sequence  NRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLP
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Template Sequence  KEQTFARYDIMTVGEANGVTVDEAEQWVGEENGVFNMIFQFEHLGLWERRASIDVRRLKRTLTKWQ. KGLENRGWNALFL
Template Known Secondary structure  TGGGSS

TT

TTTT
SSS
S
S

TT










.TTT

B
S
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   242.......250.........260.........270.........280.........290.........300....... ..310.........320
 
   523......530.........540.........550.........560.........570.........580
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Query Sequence  LSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNH. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ENHDL. . . . . PRSVSTWGNDRDYWAESAKALGALYFFMQGTPFIYQGQEIGMTNVRFDDIRDYRDVSALRIIWKTGRDNS
Template Known Secondary structure 

TTS.....

TS
SSSSTSSSTTGGGT





SSGGG

S


GGGG
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   323.... ..330.........340.........350.........360.........370.........380.........390.......
 
   581........590.. .......600.........610.........620.........630.......
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Query Sequence  DASLDWHLLEGG. . . . . . . . . . . . . . . . . . . . . . . DNWHHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERS
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Template Sequence  RTPMQWSGASNAGFTTGTPWIKVNENYRTINVEAERRDPNSVWSFYRQMIQLRKANELFVYGTYD. . . . . . . LLLENHPS
Template Known Secondary structure  TS




SSGGGGS
SS

SS


GGGGTSS
TTS
TS.......STT
SS
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   411........420.........430.........440.........450.........460.........470..... ....480...
 
   638.640.........650.........660.........670.........680.........690.........700.........710.......
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Query Sequence  VLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPP
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Template Sequence  IYAYTRTLGR. DRALVVVNLSDRPSL. YRYDGFRLQSSDLALSNYPVRPHK. . . . . . . . . . . . . . . . . . . . NATRFKLKP
Template Known Secondary structure  TT.
SSS
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TTS
B
GGGSS




S....................SBS
T
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   484.....490... ......500........ .510.........520.........530.. .......540.
 
   718.720.......
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Query Sequence  LATIWLVREA
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Template Conservation      
     
Template Sequence  YEARVYIWKE
Template Known Secondary structure  T

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   542.......550.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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