Job Description P07762 Confidence 98.77% Date Thu Jan 5 11:00:31 GMT 2012 Rank 118 Aligned Residues 320 % Identity 16% Template c2yfnA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase-sucrose kinase agask; PDBTitle: galactosidase domain of alpha-galactosidase-sucrose kinase,2 agask Resolution 1.45 Å

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.									.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		R	E	L	A	D	Q	L	V	P	Y	A	K	W	M	G	F	T	H	L	E	L	L	P	I	N	E	H	P	F	D	G	S	W	G	Y	Q	P	T	G	L	Y	A	P	T	R	R	F	G	T	.	.	.	.	.	.	.	.	R	D	D	F	R	Y	F	I	D	A	A	H	A	A	G	L	N	V	I	L	D	W	V
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.													.	.	.						.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.													.	.	.
Template Sequence		G	D	T	I	V	D	L	A	K	E	A	A	S	L	G	I	D	M	V	V	M	.	.	.	.	.	.	.	.	D	D	G	W	F	G	K	R	N	D	D	N	.	.	.	S	S	L	G	D	W	Q	V	N	E	T	K	L	G	G	S	L	A	E	L	I	T	R	V	H	E	Q	G	M	K	F	G	I	W	I	E
Template Known Secondary structure														T	T	T							.	.	.	.	.	.	.	.		S	S	S	B	T	T		S	S	T	T	.	.	.	S		T	T			S	B						T	S												T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.									.	.	.	.	370	.	.	.	.	.	.	.				.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	H	F	P	T	D	D	F	A	L	A	E	F	D	G	T	N	L	Y	E	H	S	D	P	R	E	G	Y	H	Q	D	W	N	T	L	I	Y	N	Y	G	R	R	E	V	S	N	F	L	V	G	N	A	L	Y	W	I	E	R	F	G	I	D	A	L	R	V	D	A	V	A	S	M	I	Y	R	D	Y	S	R
Query Conservation
Alig confidence																					.	.	.																																																				.	.	.	.	.	.	.
Template Conservation																					.	.	.																																																				.	.	.	.	.	.	.
Template Sequence		P	E	M	I	N	E	D	S	D	L	Y	R	A	H	P	D	W	A	I	.	.	.	R	I	Q	G	K	K	P	V	R	S	R	N	Q	L	L	L	D	F	S	R	K	E	V	R	D	C	V	F	D	Q	I	C	V	V	L	D	Q	G	K	I	D	Y	V	K	W	D	M	N	R	S	M	.	.	.	.	.	.	.
Template Known Secondary structure		T	T				S	S	S							G	G	G	B		.	.	.			T	T	S					B	T	T	B			B		T	T																	T	T	S											S			.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.																																																				.	.	.	.	.	.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.				.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		K	E	G	E	W	I	P	N	E	F	G	G	R	E	N	L	E	A	I	E	F	L	R	N	T	N	R	I	L	G	E	Q	V	S	G	A	V	T	M	A	E	E	S	T	D	F	P	G	V	S	R	P	Q	D	M	G	G	L	G	F	W	Y	K	W	N	L	G	W	M	H	D	T	L	D	Y	M	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	D	V	Y	A	G	N	L	S	Y	D	Y	V	L	G	V	Y	D	F	M	E	R	L	C	S	R	Y	P	D	L	L	L	.	.	.	.	.	.	.	.	.	.	.	.	E	G	C	S	G	G	G	G	R	F	D	A	G	.	.	.	.	.	.	.	.	M	L	Y	Y	S	P	Q	I	W
Template Known Secondary structure		.	.	.	.	.	.		S			S	T	T																					T	T				.	.	.	.	.	.	.	.	.	.	.	.				B	T	B	B	T	T		S			.	.	.	.	.	.	.	.			T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
								484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.													.	.	.	.	520	.	.	.	.	.	.	.	.									.	530	.	.	.	.	.	.	.
					494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	K	L	D	P	V	Y	R	Q	Y	H	H	D	K	L	T	F	G	I	L	Y	N	Y	T	E	N	F	V	L	P	L	S	H	D	E	V	V	H	G	K	K	S	I	L	D	R	M	P	G	D	A	W	Q	K	F	A	N	L	R	A	Y	Y	G	W	M	W	A	F	P	G	K	K	L	L	F	M	G	N
Query Conservation		.	.	.
Alig confidence		.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		C	S	D	N	T	D	A	I	N	R	T	R	I	Q	Y	G	T	S	F	F	Y	P	V	S	A	M	G	A	H	V	S	A	V	P	N	H	Q	T	G	R	V	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	T	R	G	V	T	A	M	A	G	T	F	G	Y	E	L	.	.
Template Known Secondary structure			B	S															T	T	T	S		G	G	G								S	S		T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	T					S	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580																			.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	A	Q	G	R	E	W	N	H	D	A	S	L	D	W	H	L	L	E	G	G	D	N	W	H	H	G	V	Q	R	L	V	R	D	L	N	L	T	Y	R	H	H	K	A	M	H	E	L	D	F	D	P	Y	G	F	E	W	L	V	V	D	D	K	E	R	S	V	L	I	F	V	R	R	D	K	E	G	N	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	A	L	L	S	D	E	E	K	Q	Q	I	R	E	Q	I	K	T	Y	K	K	Y	E	T	L	I	.	.	.	.	.	N	E	G	T	Y	W	R	L	S	D	P	F	T	D	E	I	A	A	W	M	S	V	S	E	E	Q	D	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S																							.	.	.	.	.			S						S		T	T	T	S	S									T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
																						598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.						.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
		651	.	.	.	.						.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		I	I	V	A	S	.	.	.	.	.	N	F	T	P	V	P	R	H	D	Y	R	F	G	I	N	Q	P	G	K	W	R	E
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		A	L	V	S	V	V	R	L	M	A	E	A	N	Q	A	T	V	Y	V	R	L	R	G	L	K	P	D	A	V	Y	L	E
Template Known Secondary structure													S	S										S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions