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Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank12Aligned Residues545
% Identity19%Templatec2wanA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: pullulanase from bacillus acidopullulyticus
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150... ......160.........170.........180.........190.........200..
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Query Sequence  LGAHADTMDGVTGTRFSVWAPNARRVSVV. . GQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLK
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Template Sequence  LGNVYSK. . . . DATSFRVWAPTASNVQLLLYNSEKGSITKQLEMQKSDN. GTWKLQVSGNLENWYYLYQVT. VNGTTQTA
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S....S
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SSSSSS

S

GG.GS

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   318.320.... .....330.........340.........350.........360.. .......370.........380... ......390.
 
   203......210.........220. ........230.........240.........250.........260 .........270
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Query Sequence  SDPYAFEAQMRPETASLIC. GLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNN. . FWLSYRELAD. . . . . . . . .
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Template Sequence  VDPYARAISVNATRGMIVDLKATDPAGWQGDHEQTPANPVDEVIYEAHVRDFSIDANSGMKNKGKYLAFTEHGTKGPDHV
Template Known Secondary structure 

TT
SSBSGGGSS


GGGGS
TTGGG





SSGGG



STTS

SSTTSGGGGG

S
B
GGG
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   392.......400.........410.........420.........430.........440.........450.........460.........470.
 
   271........280.........290.... .....300.........310.... .....320.........330.....
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Query Sequence  . QLVPYAKWMGFTHLELLPINEHPF. . . . . . . DGSWGYQPTGLYAPTRRFGT. . . . . . . RDDFRYFIDAAHAAGLNVILD
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Template Sequence  KTGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMD
Template Known Secondary structure  B
T

S

SSS
TTSTTS




S
GGGSS
SSTTTT
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   472.......480.........490.........500.........510.........520.........530.........540.........550.
 
   336...340.........350.........360.........370.........380.........390.........400.........410.....
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Query Sequence  WVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDY
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Template Sequence  VVYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGGNEFATEHPMAQKFVLDSVNYWVNEYHVDGFRFDLMALL. . . . .
Template Known Secondary structure 
TT

S
SSSSSTTTTB
B
TTS
B

TT



B
TTS


TTGGGG.....
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   552.......560.........570.........580.........590.........600.........610.........620......
 
   416...420.........430.........440.........450.........460.........470... ......480.........490
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Query Sequence  SRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMG. . . . . GLGFWYKWNLGWMHDTL
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Template Sequence  . . . . . . . . . . . . . . . . . . . GKDTMAKISNELHAINPGIVLYGEPWTGGTSGLSSDQLVTKGQQKGLGIGVFNDNIRNGLD
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TT

SS
SS

SS
TTTS

TTTTTTTT

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   628.630.........640.........650.........660.........670.........680........
 
   491 ........500.........510..... ....520.........530.........540.........550........
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Query Sequence  D. . . . . . . . . YMKLDPVYRQYHHDKLTFGILYNY. . . TENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMW
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Template Sequence  GNVFDKTAQGFATGDPNQVDVIKNGVIGSIQDFTSAPSETINYVTSHDNMTLWDKILASNPSDTEADRIKMDELAHAVVF
Template Known Secondary structure 

TT
TT


TTTT
SS
BTTTTTT
SSGGG
S

SSS


TTS
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   689690.........700.........710.........720.........730.........740.........750.........760........
 
   559560.........570.........580. ........590.........600.........610.........620.........630
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Query Sequence  AFPGKKLLFMGNEFAQGREWNHD. . . . . . . . ASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLV
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Template Sequence  TSQGVPFMQGGEEMLRTKGGNDNSYNAGDSVNQFDWS. . . . RKAQFKDVFDYFSSMIHLRNQHPAFRMTTADQIKQN. LT
Template Known Secondary structure  SBSTTGGGT


TT
S

TT

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T....T
GGGG

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   769770.........780.........790.........800..... ....810.........820.........830.........840. ..
 
   631........640...... ...650.........660.........670.........680.........690.........700......
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Query Sequence  VDDKERSVLIFVRRDK. . . . EGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHG
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Template Sequence  FLESPTNTVAFELKNYANHDTWKNIIVMYNPNKTSQT. . . LNLP. SGDWTIVGLGDQIGEKSLGHVMG. . . . . . . . . . . .
Template Known Secondary structure 



TT

SSGGG
SSS

SSS
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   844.....850.........860.........870.........880 .... .....890.........900.......
 
   707..710.........720.....
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Query Sequence  RQHSLSLTLPPLATIWLVR
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Template Sequence  . . . . . NVQVPAISTLILKQ
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   908.910.........920.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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