Return to main results Retrieve Phyre Job Id

Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank7Aligned Residues563
% Identity21%Templatec2fhfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: crystal structure analysis of klebsiella pneumoniae2 pullulanase complexed with maltotetraose
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.... .....130.........140.........150.. .......160.........170.........180.........190..
Predicted Secondary structure 
......













.





















Query SS confidence 




. . . . . .



























.







































Query Sequence  RPYET. . . . . . LGAHADTMDGVTGTRFSVWAPNARRVSV. VGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEM
Query Conservation    
  ...... 


        
  
 



 
  
 
. 



 
      
      


   
     
  
 
 
Alig confidence 




......






....
















.







































Template Conservation    
   
    


    .... 
  
 



 
  
 
 
 
                 


         
  
 
 
Template Sequence  DTYAAAAEALSYGAQLTD. . . . SGVTFRVWAPTAQQVELVIYSADKKVIASHPMTRDSASGAWSWQGGSDLKGAFYRYAM
Template Known Secondary structure  TS

T....T
TT
S
TT



TTT

GGGTT
Template Predicted Secondary structure 









....


























Template SS confidence 















































































   286...290.........300... ......310.........320.........330.........340.........350.........360.
 
   193 ......200.........210.........220........ .230.........240 .........250.........
Predicted Secondary structure  .....






















....











....











Query SS confidence 
. . . . .


































. . . .











. . . .


















Query Sequence  I. . . . . DANGNLRLKSDPYAFEAQMRPETASLICGLPEKVV. . . . QTEERKKANQFD. . . . APISIYEVHLGSWRRHTDN
Query Conservation   .....   
      



          


        ....
           ....    


 

  
      
Alig confidence 
.....






















.










....











....


















Template Conservation                  



         .
 


       
  
                
 










  
 
Template Sequence  TVYHPQSRKVEQYEVTDPYAHSLSTNSEY. SQVVDLNDSALKPEGWDGLTMPHAQKTKADLAKMTIHESHIRDLSAWDQT
Template Known Secondary structure  TTTT

TT
S
B
GGGSS.
B
TT
GGGS
TTGGG


SS

SST

TT
TT
Template Predicted Secondary structure 


















.




































Template SS confidence 















































































   362.......370.........380.........390 .........400.........410.........420.........430.........440
 
   260 .........270. ........280.........290....
Predicted Secondary structure 
...



.......











...................................
Query SS confidence 
. . .










. . . . . . .






















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  N. . . FWLSYRELADQ. . . . . . . LVPYAKWMGFTHLELLPINEHPF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   ...  


      .......

 







 
 



 
 
 ...................................
Alig confidence 
...










.......
.




















...................................
Template Conservation       



 
  
        
. 

 




 
 



 
     
                                
Template Sequence  VPAELRGKYLALTAQESNMVQHL. KQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKSSEFAGYCD
Template Known Secondary structure  S
GGGTTSGGGGG
TTS.T

S

SSS


GGG


TTSB
TSTTGGGTT
Template Predicted Secondary structure 
















.













































Template SS confidence 















































































   441........450.........460... ......470.........480.........490.........500.........510.........
 
   295....300.........310.... .....320....... ..330..
Predicted Secondary structure  ..................................



















........


Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



















. . . . . . .












.




Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGSWGYQPTGLYAPTRRFGT. . . . . . . RDDFRYFIDAAHA. AGLNV
Query Conservation  ..................................   



   
 
    


.......  


 


 

 . 

 
Alig confidence  ..................................



















.......












.




Template Conservation                                      





  
 


  
 
  
   

 


 

 


   

 
Template Sequence  SGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEGTARIKEFRTMIQAIKQDLGMNV
Template Known Secondary structure  SS
BSTT
BTTB
TTSSS






STTSS

STTTS

Template Predicted Secondary structure 




























































Template SS confidence 















































































   520.........530.........540.........550.........560.........570.........580.........590.........
 
   333......340...... ...350.........360.........370.........380.........390.........400.......
Predicted Secondary structure 









.....



































Query SS confidence 













. . . . .




























































Query Sequence  ILDWVPGHFPTDDF. . . . . ALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAV
Query Conservation 




 

      .....     

   
            

    
     

  
 
   


 







 


Alig confidence 













.....




























































Template Conservation 




 


         
  
   
 

 
     
     

  

  
 
 

  



   

 









  
Template Sequence  IMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDLM
Template Known Secondary structure 
TTS

SSS
TT

STTTSB
B
TTT

B

TTSSB
TTS


TTG
Template Predicted Secondary structure 


















































Template SS confidence 















































































   600.........610.........620.........630.........640.........650.........660.........670.........
 
   408.410.........420.........430.........440.........450.........460.........470.........480 ....
Predicted Secondary structure 













































...
Query SS confidence 








































































. . .



Query Sequence  ASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYK. . . WNLG
Query Conservation    
                 
         

      
    
   



              

 


  ... 
  
Alig confidence 


........................













































...



Template Conservation    
........................           
  
 
   



 

         
 
       

 


 
Template Sequence  LYH. . . . . . . . . . . . . . . . . . . . . . . . PKAQILSAWERIKALNPDIYFFGEGWDSNQSDRFEIASQINLKGTGIGTFSDR
Template Known Secondary structure  GGS........................BTT
TT





S
TTTS
B

TTTTTTSS

Template Predicted Secondary structure 

........................





























Template SS confidence 















































































   680.. .......690.........700.........710.........720.........730.....
 
   485....490.........500.........510.
Predicted Secondary structure 





.....................................................
Query SS confidence 


























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  WMHDTLDYMKLDPVYRQYHHDKLTFGI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation                         
   .....................................................
Alig confidence 


























.....................................................
Template Conservation   

 

     
         

  
                    
       
 
         
             
Template Sequence  LRDAVRGGGPFDSGDALRQNQGVGSGAGVLPNELTTLSDDQARHLADLTRLGMAGNLADFVLIDKDGAVKRGSEIDYNGA
Template Known Secondary structure 
S
TT

TT


GGGTTTTS

SS



TT
BTT

TTS
GGGSTT
Template Predicted Secondary structure 





















































Template SS confidence 















































































   736...740.........750.........760.........770.........780.........790.........800.........810.....
 
   512.......520.........530... ......540.........550.........560.........570.........580.
Predicted Secondary structure  ....

















.























.....
Query SS confidence  . . . .





















.















































. . . . .
Query Sequence  . . . . LYNYTENFVLPLSHDEVVHGKK. SILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHD. . . . .
Query Conservation  ....            


       .                 


 
  

 

 
 
  
 
 
        .....
Alig confidence  ....





















.















































.....
Template Conservation    
    
   



 



 

 
              
 
  


 







 
 

 


 



 
  


   
Template Sequence  PGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLATVMLGQGIAFDQQGSELLRSKSFTRDSYDSG
Template Known Secondary structure  S

BSSGGG
S

SSSS
S
TT

TSSSTTGGGT


TT
S

TTS
Template Predicted Secondary structure 









































Template SS confidence 















































































   816...820.........830.........840.........850.........860.........870.........880.........890.....
 
   582.......590. ........600.........610.........620.........
Predicted Secondary structure  ...









.............................













Query SS confidence  . . .









. . . . . . . . . . . . . . . . . . . . . . . . . . . . .





































Query Sequence  . . . ASLDWHLLEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . GDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWL
Query Conservation  ...   

     .............................       
    
 

 


  


   
         
Alig confidence  ...









.............................





































Template Conservation 
  
  

           
                             
    
 

 



 



 
    
     
Template Sequence  DWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARVKDAVATPGETELKQMTAFYQELTALRKSSPLFTLGDGATVMKRVD
Template Known Secondary structure 


TT
S

S
SSS


GGGTTSS



TS
GGGG


Template Predicted Secondary structure 



















































Template SS confidence 















































































   896...900.........910.........920.........930.........940.........950.........960.........970.....
 
   630.. .......640........ .650.........660.........670.........680.........690.......
Predicted Secondary structure  ...








.........





























Query SS confidence 


. . .















. . . . . . . . .
















































Query Sequence  VVD. . . DKERSVLIFVRRDKEG. . . . . . . . . NEIIVASNFTPVPRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTV
Query Conservation     ...     



 
    
.........  



 


        
 

  
    




   


         
Alig confidence 


...















.........














...











....














Template Conservation            



    
            
 



 
      
...
 

      
 ....               
Template Sequence  FRNTGADQQTGLLVMTIDDGMQAGASLDSRVDGIVVAINAAPESRT. . . LQDFAGTSLQLS. . . . AIQQAAGDRSLASGV
Template Known Secondary structure  S
STT

TT
STTTSS
S
TT
SSS
...
TTSSS


....TGGGSTTTT
Template Predicted Secondary structure 




























...





....












Template SS confidence 















































































   976...980.........990.........1000.........1010.........1020. ........1030... ......1040........
 
   698.700.........710.........720.......
Predicted Secondary structure 
















Query SS confidence 





























Query Sequence  HSDEIASHGRQHSLSLTLPPLATIWLVREA
Query Conservation          
   
  
 


 
 


  
 
Alig confidence 





........















Template Conservation       
........





 
  


 
 
Template Sequence  QVAADG. . . . . . . . SVTLPAWSVAVLELPQ
Template Known Secondary structure 
TTS........

TT
Template Predicted Secondary structure 





........




Template SS confidence 





























   10491050.... .....1060.........1070
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions