Job Description P07762 Confidence 97.77% Date Thu Jan 5 11:00:31 GMT 2012 Rank 146 Aligned Residues 190 % Identity 17% Template c1nouA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-hexosaminidase beta chain; PDBTitle: native human lysosomal beta-hexosaminidase isoform b Resolution 2.40 Å

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.									.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.
Query Sequence		G	S	W	R	R	H	T	D	N	N	F	W	L	S	Y	R	E	L	A	D	Q	L	V	P	Y	A	K	W	M	G	F	T	H	L	E	L	L	P	I	N	E	H	P	F	D	G	S	W	G	Y	Q	P	T	G	L	.	.	.	.	.	.	.	.	Y	A	P	T	R	R	F	G	T	R	D	D	F	R	Y	F	I
Query Conservation																																																									.	.	.	.	.	.	.	.
Alig confidence															.	.																									.	.	.	.													.	.	.	.	.	.	.	.								.
Template Conservation															.	.																									.	.	.	.																												.
Template Sequence		R	G	I	L	I	D	T	S	R	H	Y	L	P	.	.	V	K	I	I	L	K	T	L	D	A	M	A	F	N	K	F	N	V	L	H	W	H	I	V	.	.	.	.	D	D	Q	S	F	P	Y	Q	S	I	T	F	P	E	L	S	N	K	G	S	Y	S	L	S	H	V	Y	.	T	P	N	D	V	R	M	V	I
Template Known Secondary structure								S	S	S	S				.	.														T	T										.	.	.	.		S	S				B			S	S		T							S	S	S	T	T	S		B	.
Template Predicted Secondary structure															.	.																									.	.	.	.																												.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		D	A	A	H	A	A	G	L	N	V	I	L	D	W	.	V	P	G	H	F	P	T	D	D	F	A	L	A	E	F	D	G	T	N	L	Y	E	H	S	D	P	R	E	G	Y	H	Q	D	W	N	T	L	I	Y	N	Y	G	R	R	E	V	S	N	F	L	V	G	N	A	L	Y	W	I	E	R	F	G	I	D	A
Query Conservation																.
Alig confidence																.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	A	R	L	R	G	I	R	V	L	P	E	F	D	T	P	G	H	T	L	.	.	.	.	.	.	.	.	.	.	.	S	W	G	K	G	Q	K	D	L	L	T	P	C	Y	S	L	D	S	F	G	P	I	N	P	T	L	N	T	T	Y	S	F	L	T	T	F	F	K	E	I	S	E	V	F	P	D	Q	F
Template Known Secondary structure							T	T										S	S	S		T	.	.	.	.	.	.	.	.	.	.	.	T					S	T	T										S						T	T																					S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.												.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		402	.	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		L	R	V	.	.	D	A	V	A	S	M	I	Y	R	D	Y	S	R	K	E	G	E	W	I	P	N	E	F	G	G	R	E	N	L	E	A	I	E	F	L	R	N	T	N	R	I	L	G	E	Q	V	S	G	A	V	T	M	A	E
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		I	H	L	G	G	D	E	V	E	F	K	C	W	E	S	N	P	K	I	Q	D	F	M	R	Q	K	G	F	G	T	D	F	K	K	L	E	S	F	Y	I	Q	K	V	L	D	I	I	A	T	I	N	K	G	S	I	V	W	Q	E
Template Known Secondary structure								S																			T	T		T	T		T																		T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions