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Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank2Aligned Residues578
% Identity100%Templatec1m7xC_
PDB info PDB header:transferaseChain: C: PDB Molecule:1,4-alpha-glucan branching enzyme; PDBTitle: the x-ray crystallographic structure of branching enzyme
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  HLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANG
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Template Conservation          

         
  
 



 
  
 
                    
 
   
     
  
   
    
Template Sequence  HLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANG
Template Known Secondary structure 


GGGTSSTT
TT
S
TTTTS
TTTSB
TTTTT

TT

TTS
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   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  NLRLKSDPYAFEAQMRPETASLICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAK
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Template Sequence  NLRLKSDPYAFEAQTA. . . . SLICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAK
Template Known Secondary structure 


TT
SS



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TTSTTS


GGGS


TTT




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   198.200.........210... ......220.........230.........240.........250.........260.........270...
 
   278.280.........290.........300.........310.........320.........330.........340.........350.......
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Query Sequence  WMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLY
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Template Sequence  WMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLY
Template Known Secondary structure  TT





S
STTTTSS
S
TTS

TT

SSS


STTSSTTGGGTTSS
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   278.280.........290.........300.........310.........320.........330.........340.........350.......
 
   358.360.........370.........380.........390.........400.........410.........420.........430.......
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Query Sequence  EHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIE
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Template Conservation    ............    
     
   
 
    
  







 

   
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Template Sequence  EH. . . . . . . . . . . . SLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRE. . . . . . . . . . . . . . . . . NLEAIE
Template Known Secondary structure  S
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STT







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   358. 360.........370.........380.........390.........400.. ......
 
   438.440.........450.........460.........470.........480.........490.........500.........510.......
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Query Sequence  FLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTE
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Template Conservation               
   

 
               
   
   
                                   
Template Sequence  FLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTE
Template Known Secondary structure  STT


SS

TTTTB
TTTTSB

S
S
TTTTTTTTTTTTTTTTSGGGS
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   438.440.........450.........460.........470.........480.........490.........500.........510.......
 
   518.520.........530.........540.........550.........560.........570.........580.........590.......
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Query Sequence  NFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHH
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Template Conservation   
    


                        
 
    

  


 

 
 
 
            
           
Template Sequence  NFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHH
Template Known Secondary structure 

GGGSSTT


TTTT

SSTTSSSTTGGGT
SS


TTS


TTTT
SS

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   518.520.........530.........540.........550.........560.........570.........580.........590.......
 
   598.600.........610.........620.........630.........640.........650.........660.........670.......
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Query Sequence  GVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWRE
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Template Conservation        
 

 

    

                     



 
        


 
          
  
  
    
Template Sequence  GVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWRE
Template Known Secondary structure  TT
STTTSSSSSGGGS

TTTT


TTS

SSS


B
SS
S
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   598.600.........610.........620.........630.........640.........650.........660.........670.......
 
   678.680.........690.........700.........710.........720........
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Query Sequence  ILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE
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Template Sequence  ILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE
Template Known Secondary structure  TTSTGGG



S

S

B


BTTBSSB


TT

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   678.680.........690.........700.........710.........720........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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