Return to main results Retrieve Phyre Job Id

Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank44Aligned Residues384
% Identity18%Templatec1lwhA_
PDB info PDB header:transferaseChain: A: PDB Molecule:4-alpha-glucanotransferase; PDBTitle: crystal structure of t. maritima 4-alpha-glucanotransferase
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260.........270.........280.........290.........300.........310.........320..
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  ISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFI
Query Conservation    


 

  
         


      

 







 
 



 
 
    



   
 
    


  


 

Alig confidence 











.
















.





















..
























Template Conservation   
 
 
    
 .
      

  

   
.


  


  
 
 

      .. 

   
   

   

  


 

Template Sequence  MIGYQIYVRSFR. DGNLDGVGDFRGLKNAV. SYLKELGIDFVWLMPVFSSISF. . HGYDVVDFYSFKAEYGSEREFKEMI
Template Known Secondary structure 


GGGT
.
SSSSSS

T.TT
S



SSS..S

S
S
GGG

Template Predicted Secondary structure 





.








.












..
















Template SS confidence 















































































   1........10.. .......20......... 30.........40.........50. ........60.........70......
 
   323......330.........340.........350 .........360.........370 ....
Predicted Secondary structure 













..........................



















..



Query SS confidence 



























. . . . . . . . . . . . . . . . . . . . . . . . . .



















. .



Query Sequence  DAAHAAGLNVILDWVPGHFPTDDFALAE. . . . . . . . . . . . . . . . . . . . . . . . . . FDGTNLYEHSDPREGYHQDW. . NTLI
Query Conservation 
 

  

 





 

          .......................... 

   
            
..
   
Alig confidence 



























..........................



















..



Template Conservation     
  

 



 
 

                     
                                       
Template Sequence  EAFHDSGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPD
Template Known Secondary structure  TT

TTB

TTSTT
TTB
B

TT

TT
B
SSS

B

TTS

TT
TTS
B
Template Predicted Secondary structure 

























































Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   375....380.........390.........400.........410.........420.........430.........440.........450....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  YNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAV
Query Conservation   
     

  
 
   


 







 


  
                 
         

      
    
   
Alig confidence 



















.














.....................
















..



Template Conservation 

     
          
 .  





 
     .....................                 ..    
Template Sequence  LNYDNPQVFDEMKRLVLHLL. DMGVDGFRFDAAKHM. . . . . . . . . . . . . . . . . . . . . RDTIEQNVRFWKYFLSD. . LKGI
Template Known Secondary structure  B
TTS.T

TTGGGS.....................SSSTT..

S
Template Predicted Secondary structure 




.







.....................




..

Template SS confidence 















































































   157..160.........170...... ...180.........190. ........200........ .210..
 
   455....460.........470.........480.........490.........500.........510.........520.........530....
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  TMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKS
Query Conservation 



              

 


   
                         
               


        
Alig confidence 

















....



















..



































Template Conservation     
              ....     
              ..                         


        
Template Sequence  FLAEIWAEARMVDEHGRI. . . . FGYMLNFDTSHCIKEAVWKE. . NTRVLIESIERAVIAKDYLPVNFTSNHDMSRLASFE
Template Known Secondary structure 


S
SSS....
T..
TTSS
SSS

TTS

GGGGG
Template Predicted Secondary structure 










....




..


















Template SS confidence 















































































   213......220.........230 .........240.........250 .........260.........270.........280......
 
   535....540.........550.........560.........570.........580. ........590.....
Predicted Secondary structure 























......













.............
Query SS confidence 














































. . . . . .













. . . . . . . . . . . . .
Query Sequence  ILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHD. . . . . . ASLDWHLLEGGDNW. . . . . . . . . . . . .
Query Conservation                  


 
  

 

 
 
  
 
 
        ......   

         .............
Alig confidence 




........

































......













.............
Template Conservation       ........     
       

 
 
  
 
 
                                         
Template Sequence  GGFSK. . . . . . . . EKIKLSISILFTLPGVPLVFYGDELGMKGVYQKPNTEVVLDPFPWNESMCVEGQTFWKWPAYNGPFS
Template Known Secondary structure  G


........TTSSSTTGGGT





SS
GGGGS



SSTTS
STT


SS

SS

SSS
Template Predicted Secondary structure 


........
















































Template SS confidence 















































































   287..290. ........300.........310.........320.........330.........340.........350........
 
   596...600.........610.........620.........630.........640.........650.........660.....
Predicted Secondary structure  ..........
























Query SS confidence  . . . . . . . . . .





































































Query Sequence  . . . . . . . . . . HHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDY
Query Conservation  ..........   
    
 

 


  


   
                 



 
    
  



 


       
Alig confidence  ..........
























........


















.
















Template Conservation                      
  

     
  
 ........         


  
    .   


 
      
  
Template Sequence  GISVEYQKRDPDSILSHTLGWTRFRKENQWIDRAK. . . . . . . . LEFLCKEDKFLVYRLYDDQ. HSLKVFHNLSGEEVVFE
Template Known Secondary structure  S
STT
TTST
GGGGG
........
SSTT.
SSS

T
Template Predicted Secondary structure 






........





.




Template SS confidence 















































































   359360.........370.........380.........390... ......400.........410.. .......420.........
 
   666...670........
Predicted Secondary structure 






Query SS confidence 












Query Sequence  RFGINQPGKWREI
Query Conservation   
 

  
    
Alig confidence 




.






Template Conservation       .       
Template Sequence  GVKMK. PYKTEVV
Template Known Secondary structure  T

.TT

Template Predicted Secondary structure 


.


Template SS confidence 












   430.... .....440.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions