 |
| Job Description | P07762 | | Confidence | 94.46% | Date | Thu Jan 5 11:00:31 GMT 2012 |
| Rank | 258 | Aligned Residues | 50 |
| % Identity | 22% | Template | c1j0yD_ |
| PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:beta-amylase; |
PDBTitle: beta-amylase from bacillus cereus var. mycoides in complex2 with glucose
|
| Resolution | 2.10 Å |
|
| | |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | |
|
|
|
|  | | |  |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | | | |
|
|
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
E | L | A | D | Q | L | V | P | Y | A | K | W | M | G | F | T | H | L | E | L | L | P | I | N | . |
. |
. |
. |
. |
. |
E | H | P | F | D | G | S | W | G | Y | Q | P | T | G | L | Y | A | P | T | R | R | F | G | T | R | D | D | F | R | Y | F | I | D | A | A | H | A | A | G | L | N | V | I | L |
| Query Conservation | |
| | | | |
|
| |
|
|
|
|
|
|
|
| |
| |
|
|
|
| | . | . | . | . | . | . |
| |
| | | | |
|
|
|
| | | |
| |
| | | | |
|
|
| | |
|
|
| |
|
|
| |
|
| | |
|
| |
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | |
|
|
| |
|
| |
|
|
|
| |
| |
| . |
|
| |
|
| |
|
|
| | |
|
| |
|
|
|
| | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| |
|
|
|
|
| | |
|
|
|
|
|
|
|
| Template Sequence | |
E | T | F | E | N | D | L | R | W | A | K | Q | N | G | F | Y | A | I | T | V | . |
D | F | W | W | G | D | M | E | K | N | G | D | Q | Q | F | D | F | S | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | Q | R | F | A | Q | S | V | K | N | A | G | M | K | M | I | P |
| Template Known Secondary structure | |
| | | | | | | | | | | | T | T | | | | | | | . | | | | | | | | T |
| S | S | T | T |
|
|
|
| | | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | | | | | | | | | | | T | T |
| | | | |
| Template Predicted Secondary structure | |
| | | | | | | | | | | |
|
|
|
| | | | | . | | | | | | | |
|
|
|
|
|
|
|
|
| | | | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | | | | | | | | | | |
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
