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Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank81Aligned Residues364
% Identity15%Templatec1gcyA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucan 1,4-alpha-maltotetrahydrolase; PDBTitle: high resolution crystal structure of maltotetraose-forming2 exo-amylase
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250.........260.... .....270.........280.........290..... ....300.........310.........320
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Query Sequence  EVHLGSWRRHTDNNFWLS. YRELADQLVPYAKWMGFTHLELLPINEHPFD. . . . . GSWGYQPTGLYAPTRRFGTRDDFRY
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Template Sequence  EIILQGFHWNVVREAPNDWYNILRQQA. ATIAADGFSAIWMPVPWRDFSSWSKSGGGEGYFWHDF. NKNGRYGSDAQLRQ
Template Known Secondary structure 




TTSTTT.TT
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S




B


B

SSTT
SSS.
S
SSS

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   17..20.........30.........40... ......50.........60.........70.........80 .........90....
 
   321........330.........340.........350.........360 .........370.........380.........
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Query Sequence  FIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHS. . . . . . . . . . . DPREGYHQDWNTLIYNYGRREVSNFLVGN
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Template Sequence  AASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDE
Template Known Secondary structure  TT


SB

TT
SS
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SSSS
BGGGS


SSS
BTTBSS

STTSTTBB
TTS
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   390.........400.........410.........420.........430.........440.........450.........460.........
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Query Sequence  ALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRP
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Template Sequence  FTNLRSQYGAGGFRFDFVRGY. . . . . . . . . . . . . . . . . . . . . . . . APERVNSW. . . MTDSADNSFCVGELWKGPSEYPNW
Template Known Secondary structure  S
S
GGGS........................
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TTS




GGGS
TT
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   178.180.........190........ .200...... ...210.........220.........230
 
   470.........480....... ..490.........500.........510.........520.........530.........540..
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Query Sequence  QDMGGLGFWYKWNLGWMH. . . . . . . DTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGD
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Template Sequence  DWRNTASWQQIIKDWSDRAKCPVFDFALKERMQNGSIADWKHGLNGNPDPRWREVAVTFVDNHDTGYSPGQNGGQHHWAL
Template Known Secondary structure  SGGGGS
TS

S
GGGGGGSGGG
SSTT
S

TTTSB
SSGGGB

SS

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   231........240.........250.........260.........270.........280.........290.........300.........310
 
   543......550.........560.........570.........580.........590.........600.........610.........620..
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Query Sequence  AWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFD
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Template Sequence  QD. . . GLIRQAYAYILTSPGTPVVYWDHMYDWG. . . . . . . . . . . . . . . . . . . . . . . YGDFIRQLIQVRRAAGVRADSA. .
Template Known Secondary structure 
G...GGSSSTSS.......................
T

TT
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   311. .......320.........330.........340 .........350.........360..
 
   623......630.........640.........650.........660.........670.........680
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Query Sequence  PYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILN
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Template Sequence  . . . . . . ISFHSGYSGLVATVS. . . GSQQTLVVALNSDLGNP. . . GQVA. SGSFSEAVN
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TTSSS...
SS
S




G...GGT
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   363......370....... ..380.........390.... .... .400.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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