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Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank17Aligned Residues503
% Identity21%Templatec1ehaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glycosyltrehalose trehalohydrolase; PDBTitle: crystal structure of glycosyltrehalose trehalohydrolase2 from sulfolobus solfataricus
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180.........190.........200....
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Query Sequence  LGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSD
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Template Sequence  FAYKIDG. . . . NEVIFTLWAPYQKSVKLKV. . . . LEKGLYEMERDEK. GYFTITLNNVKVRDRYKYVL. . . . DDASEIPD
Template Known Secondary structure 
S

S....S



TT
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B
BB....SSS
B





TT.S

SS

S



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   2...... .10.........20....... ..30.........40 .........50.........60 ........
 
   205....210.........220.........230.........240.........250.........260.........270.........280....
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Query Sequence  PYAFEAQMRPETASLICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHL
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Template Sequence  PASRYQPEGVHGPSQIIQES. . KEFNNETF. . . LKKEDLIIYEIHVGTFTPE. . . . . . GTFEGVIRKL. DYLKDLGITAI
Template Known Secondary structure  TT
S

SSSTTS





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S

S...

SSS


TTTSSSS......
ST.T

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   6970.........80........ .90...... ...100.........110..... ....120..... ....130......
 
   285....290.........300.........310.........320.........330.........340.........350.........360....
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Query Sequence  ELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPRE
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Template Sequence  EIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGNYMVKLGPYFSQKYKTPWG
Template Known Secondary structure 


B

SSS


STT


TTSB
STT

T


S


SSS

STTTS

S
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SSS
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   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   365....370.........380.........390.........400.........410.........420.........430.........440....
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Query Sequence  GYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNR
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Template Sequence  L. . . . . TFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLDAVHAI. . . . . . . . . . . . . . . . . . . . IDTSPKHILEEIAD
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SSSTTTTTS


TTGGG
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   217 ..220.........230.........240.........250....... ..260.........270.
 
   445....450.........460.........470.........480.........490.........500.........
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Query Sequence  ILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTF. . . . . . . . . . . . . . .
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Template Sequence  VVH. . KYNRIVIAESDLNDPRVVNPKEKVGYNIDAQWVDDFHHSIHAYLTGERQGYYTDFGNLDDIVKSYKDVFVYDGKY
Template Known Secondary structure  ..T



S

TTTT

TTTT



S
S


SGGGGG


SS
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   272.. .....280.........290.........300.........310.........320.........330.........340.........
 
   510.........520.........530.........540.........550.........560.........570........
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Query Sequence  . . . . . . . . . . . GILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREW
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Template Sequence  SNFRRKTHGEPVGELDGCNFVVYIQNHDQVGNRGKGERIIKLVDR. . . . ESYKIAAALYLLSPYIPMIFMGEEYGEENPF
Template Known Secondary structure  TTTT



S

GGG

S

TTSS


SGGGS
....TSSS


TTGGGT




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   350.........360.........370.........380.........390.... .....400.........410.........420.....
 
   579580..... ....590.........600.........610.........620.........630.
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Query Sequence  NHDASLD. . . . . . . . . . . . . . . . . . . . . . . . . . . WHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVV
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Template Sequence  YFFSDFSDSKLIQGVREGRKKENGQDTDPQDESTFNASKLSWKIDEEIFSFYKILIKMRKELSIACDRRVNVV. . . . . . .
Template Known Secondary structure 






STT


S
TTSTTS





T
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   426...430.........440.........450.........460.........470.........480.........490........
 
   632.......640.........650.........660.........670.........680.........690.........700.........710.
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Query Sequence  DDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSL
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Template Conservation  ..          .....     
 
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Template Sequence  . . NGENWLIIKG. . . . . REYFSLYVFSKSSIE. . . . . VKYSGTLLLSSNNSFPQ. . . . . . . . . . . . . . . . . . . HIEEGKY
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SS
.....SS

SSS
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B

SSS


S...................B

SS
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   499500........ .510.........520... ......530.........540 .......
 
   712.......720....
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Query Sequence  SLTLPPLATIWLV
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Template Conservation    ...  
     
Template Sequence  EF. . . DKGFALYK
Template Known Secondary structure  ...
S

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   548. 550.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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