 |
Job Description | P0A8R9 | Confidence | 94.57% | Date | Thu Jan 5 11:08:36 GMT 2012 |
Rank | 136 | Aligned Residues | 41 |
% Identity | 20% | Template | d2p4wa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| PF1790-like
|
Resolution | 2.60 |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | |
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | E | L | L | K | T | F | L | E | V | S | R | . |
T | R | H | F | G | R | A | A | E | S | L | Y | L | T | Q | S | A | V | S | F | R | I | R | Q | L | E | N | Q |
Query Conservation |   |
|
|   |   |
|   |   |
|   |   |
|   |   | . |   |
|
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
N | E | T | R | R | R | I | L | F | L | L | T | K | R | P | Y | F | V | S | E | L | S | R | E | L | G | V | G | Q | K | A | V | L | E | H | L | R | I | L | E | E | A |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|