Job Description P0A8R9 Confidence 99.58% Date Thu Jan 5 11:08:36 GMT 2012 Rank 16 Aligned Residues 187 % Identity 9% Template d2fyia1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.80

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		H	T	S	R	H	N	E	F	S	I	G	A	S	A	S	L	W	E	C	M	L	N	Q	W	L	G	R	L	Y	Q	N	Q	D	A	H	T	G	L	Q	F	E	A	R	I	A	Q	R	Q	S	L	V	K	Q	L	H	E	R	Q	L	D	L	L	I	T	T	E	A	P	K	.	M	D	E	F	S	S	Q	L	L	G
Query Conservation																																																																							.
Alig confidence																													.	.	.																																								.
Template Conservation																													.	.	.
Template Sequence		T	N	D	T	S	G	V	L	T	I	A	T	T	H	T	Q	A	R	Y	S	L	P	E	V	I	K	A	.	.	.	F	R	E	L	F	P	E	V	R	L	E	L	I	Q	G	T	P	Q	E	I	A	T	L	L	Q	N	G	E	A	D	I	G	I	A	S	E	R	L	S	N	D	P	Q	L	V	A	F	P	W	F
Template Known Secondary structure			T	T																	T								.	.	.						T	T																				T	S		S					S	S	S	S	T	T		T	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.														190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	F	T	L	A	L	Y	T	S	A	P	S	K	L	K	G	D	L	N	Y	L	R	L	E	W	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	Q	Q	H	E	A	G	L	I	G	A	D	E	V	P	I	L	T	T	S	S	A	E	L	A	Q	Q	Q	I	A	M	L	N	G	C	T	W	L	P
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	W	H	H	S	L	L	V	P	H	D	H	P	L	T	Q	I	S	P	L	T	L	E	S	I	A	K	W	P	L	I	T	Y	R	Q	G	I	T	G	R	S	R	I	D	D	A	F	A	R	K	G	L	L	A	D	I	V	L	S	A	Q	D	S	D	V	I	K	T	Y	V	A	L	G	L	G	I	G	L	V	A
Template Known Secondary structure											T	T		G	G	G	T	S	S	S							T	T	S							T	T	S	T	T											T	T										S	S											T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		V	S	W	A	R	.	.	.	K	K	G	G	L	H	T	V	V	D	S	T	T	L	S	R	P	L	Y	A	I	W	L	Q	N	S	D	K	N	A	L	I	R	D	L	L	K	I	N
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		E	Q	S	S	G	E	Q	E	E	E	N	L	I	R	L	D	T	R	H	L	F	D	A	N	T	V	W	L	G	L	K	R	G	Q	L	Q	R	N	Y	V	W	R	F	L	E	L	C
Template Known Secondary structure		G	G	G	G	S	T	T			T	T							T	T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions