Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8R9
Confidence96.63%DateThu Jan 5 11:08:36 GMT 2012
Rank95Aligned Residues78
% Identity18%Templated1z91a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10...... ...20.........30.........40........ .50.........60.........70....
Predicted Secondary structure 


..





....





Query SS confidence 















. .































. . . .

























Query Sequence  MDTELLKTFLEVSRTR. . HFGRAAESLYLTQSAVSFRIRQLENQLGVNLF. . . . TRHRNNIRLTAAGEKLLPYAETLMST
Query Conservation 


  
  
  
   
..
 
 

  
 


 


  
  

  

  

.... 
      

  
  
          
Alig confidence 















..































....

























Template Conservation 

  
  

  
      
  


         

  
  
   
 
 
     
 
   
 

  
             
Template Sequence  ITYPQYLALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKAVDIPGT
Template Known Secondary structure 

STTT

TS

B
SS
TTSB
SGGGGTTT
Template Predicted Secondary structure 























Template SS confidence 















































































   38.40.........50.........60.........70.........80.........90.........100.........110.......
 
   75...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  WQAA
Query Conservation      
Alig confidence 



Template Conservation      
Template Sequence  ILGL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   118.120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions