Job Description P0A8R9 Confidence 99.12% Date Thu Jan 5 11:08:36 GMT 2012 Rank 35 Aligned Residues 184 % Identity 11% Template c3mz1D_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a possible transcription regulator protein2 from sinorhizobium meliloti 1021 Resolution 1.88 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	E	F	S	I	G	A	S	A	S	L	W	E	C	M	L	N	Q	W	L	G	R	L	Y	Q	N	Q	D	A	H	T	G	L	Q	F	E	A	R	I	A	Q	R	Q	S	L	V	K	Q	L	H	E	R	Q	L	D	L	L	I	T	T	E	A	P	K	M	D	E	F	S	S	Q	L	L	G	Y	F	T	L	A
Query Conservation
Alig confidence																		.	.	.																											.	.	.
Template Conservation																		.	.	.																											.	.	.
Template Sequence		K	G	R	L	R	V	E	T	A	S	A	F	A	N	L	V	.	.	.	I	I	P	A	L	P	E	F	H	K	K	Y	P	D	I	Q	I	D	L	G	V	S	D	R	T	I	.	.	.	D	Y	L	A	E	N	V	D	C	A	I	R	A	G	T	L	T	D	Q	S	L	I	A	R	R	I	T	E	X	K	F	V
Template Known Secondary structure																	T	.	.	.													T	T												T	.	.	.	T				T	T								S					T	T	S
Template Predicted Secondary structure																		.	.	.																											.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	T	S	A	P	S	K	L	K	G	D	L	N	Y	L	R	L	E	W	G	P	D	F	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	E	A	G	L	I	G	A	D	E	V	P	I	L	T	T	S	S	A	E	L	A	Q	Q	Q	I	A	M	L	N	G	C	T	W	L	P	V
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	C	A	S	R	D	F	L	E	R	H	P	V	P	Q	H	P	S	D	L	E	K	N	C	Y	V	V	G	Y	F	L	P	K	T	G	Q	Q	X	P	F	H	F	R	R	G	N	E	E	I	E	V	S	G	R	Y	T	X	A	A	N	E	S	T	T	Y	L	A	A	A	R	A	G	L	G	V	I	Q	A	P	L
Template Known Secondary structure												S				S	S	G	G	G	G	G	T	T	S								T	T	T	T										T	T														S	S										T	T			B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		231	.	.	.	.				.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.								.
Query SS confidence							.	.	.								.
Query Sequence		S	W	A	R	K	.	.	.	K	G	G	L	H	T	V	.	V	D	S	T	T	L	S	R	P	L	Y	A	I	W	L	Q	N	S	D	K	N	A	L	I	R	D	L	L	K	I	N	V	L	D	E	V	Y
Query Conservation							.	.	.								.
Alig confidence							.	.	.								.																															.	.
Template Conservation																																																.	.
Template Sequence		F	X	V	R	E	D	L	R	N	G	T	X	V	P	V	L	P	D	W	Q	V	E	P	X	P	I	Y	L	V	Y	P	P	N	R	H	L	S	S	R	L	R	V	F	A	D	W	.	.	V	V	K	V	X
Template Known Secondary structure											T	S						T	T		B												G	G	G	T	T											.	.
Template Predicted Secondary structure																																																.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions