Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8R9
Confidence100.00%DateThu Jan 5 11:08:36 GMT 2012
Rank4Aligned Residues273
% Identity20%Templatec3hhgF_
PDB info PDB header:transcription regulatorChain: F: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga, a lysr-type transcriptional regulator from2 neisseria meningitidis.
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARK
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Template Sequence  TNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAET
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  EVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQL
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Template Sequence  EMLAVHEIPQGVLSVDSA. MPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYI. . . NLIERKVDIALRAGELDDSGLRARH
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   83......90.........100 .........110.........120.........130... ......140.........150........
 
   161........170.........180.........190.. .......200.........210.........220.......
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Query Sequence  LGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQ. . . . . . . . . . . . . QHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTW
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Template Sequence  LFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVC
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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   228.230...... ...240.. .......250.........260.........270........
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Query Sequence  LPVSWARKK. . . GGLHTV. . VDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEV
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Template Sequence  LSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLD. FLVEEL
Template Known Secondary structure  TSS

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GGGGG
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   239240.........250.........260.........270.........280....... ..290...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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