Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL1
Confidence100.00%DateWed Jan 25 15:20:33 GMT 2012
Rank2Aligned Residues262
% Identity21%Templated2r6gg1
SCOP infoMetI-like MetI-like MetI-like
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.... .....50.........60 .........70..
Predicted Secondary structure 












...





.......
Query SS confidence 









































. . .















. . . . . . .











Query Sequence  NLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW. . . AGWSTRWYGELLRDDA. . . . . . . MMSAVGLSLTIA
Query Conservation     
 
                 
       

         ...    
           .......    
  

   
Alig confidence 









































...















.......











Template Conservation 
  
         
       
 

   
  

                
 

   
                  
    
Template Sequence  KSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQISWDHWKLALGFSVITPPPFPVLLWLWNSVKVA
Template Known Secondary structure 

SBSS

SS

SS
SSB

SS






SS
Template Predicted Secondary structure 



















Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  ACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCT
Query Conservation           
                                                             

       
Alig confidence 




















.








































.















Template Conservation                
      .                  
                      .       

       
Template Sequence  GISAIGIVALSTTCAYAFARM. RFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFI. GLNTHGGVIFAYLGGI
Template Known Secondary structure 
.

TTSTTSS
SSSSTTS.STTSTTTT
Template Predicted Secondary structure 
.












.

Template SS confidence 















































































   93......100.........110... ......120.........130.........140.........150.... .....160.........170
 
   153......160.........170.........180.........190.........200.........210.........220.... .....230.
Predicted Secondary structure 










.
Query SS confidence 







































































.






Query Sequence  AYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGAT. TLPMLVF
Query Conservation 
         
  
   
 


   


       
 

   
 
     
              
      .

   
 
Alig confidence 







































































.






Template Conservation 
            
   
 


  



    
  
 

   
 
    

 

           
       
      
Template Sequence  ALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQ
Template Known Secondary structure  TTS
TTT

TTT



SGGG

GG
Template Predicted Secondary structure 


















Template SS confidence 















































































   171........180.........190.........200.........210.........220.........230.........240.........250
 
   232.. .....240.........250.........260......
Predicted Secondary structure  ..



Query SS confidence 


. .































Query Sequence  SSV. . RMGVNPEINALATLILGAVGIVGFIAWYLMAR
Query Conservation     ..        

   
       
      
  
Alig confidence 


..































Template Conservation              
 
   
  
          
   
Template Sequence  QYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVN
Template Known Secondary structure  GGB
SS
B
TTTT

S
Template Predicted Secondary structure 



Template SS confidence 




































   251........260.........270.........280.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions