Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL1
Confidence2.25%DateWed Jan 25 15:20:33 GMT 2012
Rank58Aligned Residues16
% Identity31%Templatec2xseA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thymine dioxygenase jbp1; PDBTitle: the structural basis for recognition of j-base containing2 dna by a novel dna-binding domain in jbp1
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280
Predicted Secondary structure 

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Query Sequence  ARAEKQRIRDIQRARR
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Template Sequence  KKRRXERKQRIEEARR
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   542.......550.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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