Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL1
Confidence3.95%DateWed Jan 25 15:20:33 GMT 2012
Rank42Aligned Residues17
% Identity35%Templatec2w2hD_
PDB info PDB header:rna-binding proteinChain: D: PDB Molecule:protein tat; PDBTitle: structural basis of transcription activation by the cyclin2 t1-tat-tar rna complex from eiav
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280
Predicted Secondary structure 

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Query Sequence  MARAEKQRIRDIQRARR
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Template Sequence  LRKKNKQRLKAIQQGRQ
Template Known Secondary structure  TT
TTT

Template Predicted Secondary structure 



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   48.50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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