Job Description P0AFL1 Confidence 100.00% Date Wed Jan 25 15:20:33 GMT 2012 Rank 7 Aligned Residues 217 % Identity 20% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		T	V	W	A	G	W	S	T	R	W	Y	G	E	L	L	R	D	D	A	.	.	.	.	M	M	S	A	V	G	L	S	L	T	I	A	A	C	A	A	T	A	A	A	I	L	G	T	I	A	A	V	V	L	V	R	F	G	R	F	R	G	S	N	G	F	A	F	M	I	T	A	P	L	V	M	P	D	V	I	T
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																																		.
Template Conservation																																																										.
Template Sequence		G	Y	T	V	T	T	G	W	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	.	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S
Template Known Secondary structure			B			B		T	T	T	T	T	S	G	G	G	T		T	T	T	S	T	T																															T		S	.	S	S	T	T								T	T					S
Template Predicted Secondary structure																																																										.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		118	.	120	.	.	.	.	.	.	.	.															.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	S	L	L	L	L	F	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	A	I	G	W	P	A	D	R	G	M	L	T	I	W	L	A	H	V	T	F	C	T	A	Y	V	A	V	V	I	S	S	R	L	R	E	L	D	R	S	I	E	E	A	A	M	D	L	G	A	T	P	L	K
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q
Template Known Secondary structure									T		S	S	S	S									T	S	S					T	T	T	S																												G	G	G	S		T									T				S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.													.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		V	F	F	V	I	T	L	P	M	I	M	P	A	I	I	S	G	W	L	L	A	F	T	L	S	L	D	D	L	V	I	A	S	F	V	S	G	P	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	T	L	P	M	L	V	F	S	S	V	R	M	G	.	.	.	.	V	N	P	E	I	N	A	L	A	T
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T
Template Known Secondary structure						T	T	G	G	G	T																	T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		248	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	L	G	A	V	G	I	V	G	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	F	L	L	V	G	A	L	A	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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