Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL1
Confidence15.59%DateWed Jan 25 15:20:33 GMT 2012
Rank21Aligned Residues15
% Identity40%Templatec1etgB_
PDB info PDB header:viral protein/rnaChain: B: PDB Molecule:rev peptide; PDBTitle: rev response element (rre) rna complexed with rev peptide,2 nmr, 19 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........
Predicted Secondary structure 
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Query Sequence  ARAEKQRIRDIQRAR
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Template Conservation 














Template Sequence  RRNRRRRWRERQRAA
Template Known Secondary structure 
Template Predicted Secondary structure 
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   38.40.........50..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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