Job Description P0ACC7 Confidence 99.66% Date Thu Jan 5 11:17:54 GMT 2012 Rank 98 Aligned Residues 199 % Identity 20% Template d2f9ca1 SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes YdcK-like Resolution 2.80

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	L	L	A	G	V	M	L	R	D	P	A	R	F	D	L	R	G	.	T	L	T	H	G	R	D	V	E	I	D	T	N	V	I	I	E	G	N	V	T	L	G	H	R	V	K	I	G	T	G	C	V	I	K	N	S	V	I	G	D	D	C	E	I	S	P	Y	T	V	V	E	D	A	N	L	A	A	A	C	T
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		W	V	D	A	D	N	V	L	S	Q	Q	G	D	C	W	I	Y	D	E	N	A	M	A	F	A	G	T	E	I	T	G	N	A	R	I	T	Q	P	C	T	L	Y	N	N	V	R	I	G	D	N	V	W	I	D	R	A	D	I	S	D	G	A	R	I	S	D	N	V	T	I	Q	S	S	S	V	R	E	E	C	A
Template Known Secondary structure				S	S	T	T	S	B		S	S	S	S					S	T	T					S	S					T	T					S	S					S	S					S	S				S	S					S	S					S	S					S					S	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.																																																								.	350
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	P	F	A	R	L	R	P	G	A	E	L	L	E	G	A	H	V	G	N	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	G	D	A	R	V	L	N	Q	S	E	I	L	A	I	Q	G	L	T	H	E	H	A	Q	I	L	Q	I	Y	D	R	A	T	V	N	H	S	R	I	V	H	Q	V	Q	L	Y	G	N	A	T	I	T	H	A	F	I	E	H	R	A	E	V	F	D	F	A	L	I	E	G	D	K	D	N	N	V	W	I	C
Template Known Secondary structure				S	S					S	S										S	S	S	T	T							S	S					S					S	S					S	S					S					S	S					S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																			.
Query SS confidence																					.																																			.
Query Sequence		K	K	A	R	L	G	K	G	S	K	A	G	H	L	T	Y	L	G	D	.	A	E	I	G	D	N	V	N	I	G	A	G	T	I	T	C	N	Y	D	G	A	N	K	F	K	T	I	I	G	D	D	V	F	V	.	G	S	D	T	Q	L	V	A	P	V	T	V	G	K	G	A	T	I	A	A	G	T	T	V	T
Query Conservation																					.																																			.
Alig confidence																					.																									.										.
Template Conservation																																														.
Template Sequence		D	C	A	K	V	Y	G	H	A	R	V	I	A	G	T	E	E	D	A	I	P	T	L	R	Y	S	S	Q	V	A	E	H	A	L	I	E	G	N	C	V	L	K	H	H	.	V	L	V	G	G	H	A	E	V	R	G	G	P	I	L	L	D	D	R	V	L	I	E	G	H	A	C	I	Q	G	E	I	L	I	E
Template Known Secondary structure		S	S					S	S							S	S	T	T							S	S					S	S					S	S					T		.					S	S					S	S	S					S						S	S					S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		429	430			.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		R	N	.	.	V	G	E	N	A	L	A	I	S	R	V	P	Q	T	Q	K
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		R	Q	V	E	I	S	G	R	A	A	V	I	A	F	D	D	N	T	I	H
Template Known Secondary structure		S						S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions