Job Description P0ACC7 Confidence 100.00% Date Thu Jan 5 11:17:54 GMT 2012 Rank 24 Aligned Residues 242 % Identity 14% Template d1yp2a2 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 2.11

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.												70	.	.
Predicted Secondary structure																.	.	.													.																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.													.																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	I	L	A	A	G	K	G	T	R	M	Y	S	.	.	.	D	L	P	K	V	L	H	T	L	A	G	K	.	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	L	K	Q	A	L	K	D	D	.	.	.	.	.	.	.	.	.	.	.	N	L	N
Query Conservation																.	.	.													.																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.													.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	R	S	V	L	G	I	I	L	R	L	Y	P	L	T	K	K	R	A	K	P	A	V	P	L	G	A	N	Y	R	L	I	D	I	P	V	S	N	C	L	N	S	N	I	S	K	I	Y	V	L	T	Q	F	N	S	A	S	L	N	R	H	L	S	R	A	Y	A	E	G	F	V	E	V	L	A	A	Q	Q	S
Template Known Secondary structure														T	T	T	T	T	T	S		G	G	G				T	T	T			T	T										T	T									S																								S		S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.
Predicted Secondary structure																										.	.																																									.	.	.	.	.
Query SS confidence																										.	.																																									.	.	.	.	.
Query Sequence		W	V	L	Q	A	E	Q	L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	A	D	D	.	.	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	I	G	L	L	T	V	K	L	D	D	P	.	.	.	.	.	T	G	Y	G	R	I	T	R	E
Query Conservation																										.	.																																									.	.	.	.	.
Alig confidence																										.	.											.	.																													.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		P	E	N	P	D	W	F	Q	G	T	A	D	A	V	R	Q	Y	L	W	L	F	E	E	H	T	V	L	E	Y	L	I	L	A	G	D	H	.	.	L	Y	R	M	D	Y	E	K	F	I	Q	A	H	R	E	T	D	A	D	I	T	V	A	A	L	P	M	D	E	K	R	A	T	A	F	G	L	M	K	I	D	E
Template Known Secondary structure		T	T	S						S								T					T	T	S			S							S			.	.																T	T		S														T	T	S							T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160																		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	K	V	T	G	I	V	E	H	K	D	A	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																																												.	.	.
Template Sequence		E	G	R	I	I	E	F	A	E	K	P	Q	G	E	Q	L	Q	A	M	K	V	D	T	T	I	L	G	L	D	D	K	R	A	K	E	M	P	F	I	A	S	M	G	I	Y	V	I	S	K	D	V	M	L	N	L	L	R	D	.	.	.	K	F	P	G	A	N	D	F	G	S	E	V	I	P	G	A	T	S	L
Template Known Secondary structure		T	S	B							S									T				G	G	G	G	S																															T	.	.	.	T		T	T				T	T	T	T								T
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L	E	R	V	Y	Q	S	E	Q	A	E	K	L	L	L	A	G	V	M	L	R	D
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		G	M	R	V	Q	A	Y	L	Y	D	G	Y	W	E	.	.	D	I	G	T	I	E	A	F	Y	N	A	N	L	G	I	T	K	K	P	V	P	D	F	S	F	Y	D	R	S	A	P	I
Template Known Secondary structure		T										S				.	.			S	S										G	G	G		S	S	S		S	S		S			S	S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions