Job Description P0ACC7 Confidence 99.94% Date Thu Jan 5 11:17:54 GMT 2012 Rank 36 Aligned Residues 229 % Identity 18% Template d1vica_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.80

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		A	M	S	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	D	L	P	K	V	L	H	T	L	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	L	K	Q	A	L	K	D	D	N	L	N	W	V	L	Q	A	E	.	Q	L	G	T	G
Query Conservation																																																																												.
Alig confidence																			.	.	.																																		.	.																				.
Template Conservation																			.	.	.																																		.	.
Template Sequence		S	F	T	V	I	I	P	A	R	F	A	S	S	R	L	P	G	.	.	.	K	P	L	A	D	I	K	G	K	P	M	I	Q	H	V	F	E	K	A	L	Q	S	G	A	S	R	V	I	I	A	T	D	N	.	.	E	N	V	A	D	V	A	K	S	F	G	A	E	V	C	M	T	S	V	N	H	N	S	G	T
Template Known Secondary structure														S	S	S	T	T	.	.	.	G	G	G				T	T														T	T		S							S		.	.										T	T									S	S
Template Predicted Secondary structure																			.	.	.																																		.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																	.	.																										.	.																		.	.	.	.	.	.
Query SS confidence																	.	.																										.	.																		.	.	.	.	.	.
Query Sequence		H	A	M	Q	Q	A	A	P	F	F	A	D	D	E	D	.	.	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	.	.	G	G	I	G	L	L	T	V	K	L	D	D	P	T	G	Y	G	.	.	.	.	.	.	R	I	T	R	E	N	G	K	V	T	G	I	V
Query Conservation																	.	.																										.	.																		.	.	.	.	.	.
Alig confidence																	.	.																										.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	L	A	E	V	V	E	K	L	A	I	P	D	N	E	I	I	V	N	I	Q	G	D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	K	F	N	V	N	M	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V	K	V	L	T	D	K	D	G	Y	V	L	Y	F	S
Template Known Secondary structure											T	T			T	T								T	T		T	T																	T		S															T		T	T	S							T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		154	.	.														.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	T	D	E	Q	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	R	E	I	V	A	V	H	P	Q	R	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation																																																.	.	.
Template Sequence		R	S	V	I	P	Y	D	R	D	Q	F	M	N	L	Q	D	V	Q	K	V	Q	L	S	D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	K	Q	Y	V	Q	W	.	.	.	A	P	T	Q	L	E	N	L	E	K	L	E	Q	L	R	V	L	Y	N	G	E	R	I	H	V	E	L	A	K	E	V
Template Known Secondary structure		S	S		S	S							T	T		S		G	G	G					T	T																					S	.	.	.										T		T	T						T	T									S	S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L	E	R	V	Y	Q	S	E
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		P	A	.	V	G	V	D	T	A	E	D	L	E	K	V	R	A	I	L	A	A	N
Template Known Secondary structure				.					S														T
Template Predicted Secondary structure				.
Template SS confidence
		234	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions