Job Description P0ACC7 Confidence 99.87% Date Thu Jan 5 11:17:54 GMT 2012 Rank 53 Aligned Residues 181 % Identity 18% Template d1vh3a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.70

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																		.	.																				.
Query SS confidence																																																		.	.																				.
Query Sequence		H	T	L	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	L	K	Q	A	L	K	D	D	N	L	N	W	V	L	.	.	Q	A	E	Q	L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	A	.	D	D	E	D	I	L	M	L	Y	G
Query Conservation																																																		.	.																				.
Alig confidence																																.	.																	.	.																				.
Template Conservation																																.	.
Template Sequence		V	I	I	P	A	R	P	X	I	Q	H	V	F	E	K	A	L	Q	S	G	A	S	R	V	I	I	A	T	D	N	.	.	E	N	V	A	D	V	A	K	S	F	G	A	E	V	C	X	T	S	V	N	H	N	S	G	T	E	R	L	A	E	V	V	E	K	L	A	I	P	D	N	E	I	I	V	N	I	Q	G
Template Known Secondary structure																				T	T		S							S		.	.										T	T								S			S	S												T	T			T	T	S							T
Template Predicted Secondary structure																																.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.														.	.	.	160	.	.	.
Predicted Secondary structure																								.	.															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	I	.	.	G	L	L	T	V	K	L	D	D	P	T	G	Y	G	.	.	.	.	.	.	R	I	T	R	E	N	G	K	V	T	G	I	V	E	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	T	D	E	Q	R
Query Conservation																								.	.															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	K	F	N	V	N	X	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V	K	V	L	T	D	K	D	G	Y	V	L	Y	F	S	R	S	V	I	P	Y	D	R	D	Q	F	X	N	L	Q	D	V	Q	K	V	Q	L	S
Template Known Secondary structure		T		S																	T	T		S															T		T	T	S							T	T	S	B						S	S		S	S							T	T				T	T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	.	.	Y	Q	E	G	R	E	I	V	A	V
Query Conservation																																												.	.
Alig confidence																								.	.	.	.	.																.	.
Template Conservation																								.	.	.	.	.
Template Sequence		D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	K	Q	Y	V	Q	.	.	.	.	.	W	A	P	T	Q	L	E	N	L	E	K	L	E	Q	L	R	V	L	Y	N	G	E	R	I	H	V	E
Template Known Secondary structure		S																						.	.	.	.	.	S										T		T	T						T	T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions