Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACC7
Confidence98.60%DateThu Jan 5 11:17:54 GMT 2012
Rank112Aligned Residues188
% Identity18%Templated1jv1a_
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases UDP-glucose pyrophosphorylase
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30. ........40...... ...50.........60.......
Predicted Secondary structure 


















...

............






Query SS confidence 




























. . .














. . . . . . . . . . . .




















Query Sequence  NNAMSVVILAAGKGTRMYSDLPKVLHTLA. . . GKAMVQHVIDAANEL. . . . . . . . . . . . GAAHVHLVYGHGGDLLKQALK
Query Conservation       




 
 
 

 
  

 



 ...
 


   
  
   ............
   
 

       
   
 
Alig confidence 




























...














............




















Template Conservation   










 




   


   
      




  
 
  

 
          

  



  
   
   
 
Template Sequence  QNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFT
Template Known Secondary structure  TT






TTS
SS
GGG




TT


SS





TTT
Template Predicted Secondary structure 




































Template SS confidence 















































































   100.........110.........120.........130.........140.........150.........160.........170.........
 
   68. 70....... ..80.........90. ........100.........110.
Predicted Secondary structure 

........



.....................



.......








Query SS confidence 

. . . . . . . .







. . . . . . . . . . . . . . . . . . . . .













. . . . . . .



















Query Sequence  DD. . . . . . . . NLNWVLQA. . . . . . . . . . . . . . . . . . . . . EQLGTGHAMQQAAP. . . . . . . FFADDEDILMLYGDVPLISV
Query Conservation    ........ 
  
   .....................   

  

     ....... 
      

   
   
  
Alig confidence 

........







.....................













.......



















Template Conservation      


    
  
 
   
     
   
     
   
 


 
  

  

 
  
   

 

 
  


 
   
Template Sequence  KHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKV
Template Known Secondary structure  TGGGGS
GGG


TTS
B
TT


GGGTTTT

TTBTT

T
Template Predicted Secondary structure 






































Template SS confidence 















































































   180.........190.........200.........210.........220.........230.........240.........250.........
 
   112..... ..120.........130.........140.........150....... ..160.........170.........180.
Predicted Secondary structure  .












.........










Query SS confidence 





.







































. . . . . . . . .























Query Sequence  ETLQRL. RDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKD. . . . . . . . . ATDEQRQIQEINTGILIANGADMK
Query Conservation    
   .          
                    
    
   .........             
 
      
 
Alig confidence 





.







































.........























Template Conservation   

  

           


 
    
 

 
   

   






           
 
 
  


  
 


 

 
Template Sequence  ADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPFLR
Template Known Secondary structure  T
TT
S

STT
S

TT
GGGS

B
TTSSBSS
Template Predicted Secondary structure 

































Template SS confidence 















































































   260.........270.........280.........290.........300.........310.........320.........330.........
 
   182.......190
Predicted Secondary structure 


Query SS confidence 








Query Sequence  RWLAKLTNN
Query Conservation           
Alig confidence 








Template Conservation           
Template Sequence  DVVNVYEPQ
Template Known Secondary structure  TTGGG
Template Predicted Secondary structure 



Template SS confidence 








   340........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions