Job Description P0ACC7 Confidence 99.89% Date Thu Jan 5 11:17:54 GMT 2012 Rank 49 Aligned Residues 224 % Identity 22% Template c3tqdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	M	S	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	D	L	P	.	K	V	L	H	T	L	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	L	K	Q	A	L	K	D	D	N	L	N	W	V	L	Q	A	E	Q	L	G	T	G
Query Conservation																						.
Alig confidence										.	.	.	.	.				.	.			.
Template Conservation										.	.	.	.	.				.	.
Template Sequence		E	F	R	V	I	I	P	A	.	.	.	.	.	R	F	D	.	.	L	P	G	K	A	L	V	D	I	A	G	K	P	X	I	Q	H	V	Y	E	S	A	I	K	S	G	A	E	E	V	V	I	A	T	D	D	K	R	I	R	Q	V	A	E	D	F	G	A	V	V	C	X	T	S	S	D	H	Q	S	G	T	E
Template Known Secondary structure										.	.	.	.	.				.	.		T	T	G	G	G				T	T														T	T		S							S											T	T								T	T			S
Template Predicted Secondary structure										.	.	.	.	.				.	.
Template SS confidence
		2	.	.	.	.	.	.	.						10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure													.																																							.	.	.	.	.	.	.
Query SS confidence													.																																							.	.	.	.	.	.	.
Query Sequence		H	A	M	Q	Q	A	A	P	F	F	A	.	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	I	G	L	L	T	V	K	.	.	.	.	.	.	.	L	D	D	P	T	G	Y	G	R	I	T	R	E	N	G	K	V	T	G	I	V	E	H
Query Conservation													.																																							.	.	.	.	.	.	.
Alig confidence													.																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	A	E	A	A	V	A	L	G	F	E	D	D	E	I	I	V	C	L	Q	G	D	E	P	L	I	P	P	D	A	I	R	K	L	A	E	D	L	D	E	H	D	K	V	A	S	L	C	T	P	I	T	E	V	D	E	L	F	N	P	H	S	T	K	V	V	L	N	R	R	N	Y	A	L	Y	F	S	H	A
Template Known Secondary structure										T	T			T	T								T	T																																				T		T	T	S							T	T	S	B						S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		156	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	A	T	D	.	.	.	.	.	.	.	.	.	.	E	Q	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G
Query Conservation							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																										.	.																	.																	.
Template Conservation																																										.	.																	.																	.
Template Sequence		P	I	P	W	G	R	D	T	F	S	D	K	E	N	L	Q	L	N	G	S	H	Y	R	H	V	G	I	Y	A	Y	R	V	G	F	L	E	E	Y	L	S	.	.	W	D	A	C	P	A	E	K	X	E	A	L	E	Q	L	R	.	I	L	W	H	G	G	R	I	H	X	V	V	A	K	S	K	.	C	P	P	G
Template Known Secondary structure			S	S			T	T	T	T	T		G	G	G				S	S																						.	.	S										T		T	T			.				T	T									S	S		.
Template Predicted Secondary structure																																										.	.																	.																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	N	R	L	Q	L	S	R	L	E	R	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	T	E	E	D	L	E	R	V	R	A	Y	F
Template Known Secondary structure			S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions