Job Description P0ACC7 Confidence 100.00% Date Thu Jan 5 11:17:54 GMT 2012 Rank 21 Aligned Residues 237 % Identity 15% Template c3pnnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83 Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.									.	.	.	.	.
Query SS confidence																																																												.									.	.	.	.	.
Query Sequence		N	A	M	S	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	D	L	P	K	V	L	H	T	L	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	.	L	K	Q	A	L	K	D	D	.	.	.	.	.	N	L	N	W	V	L	Q	A
Query Conservation																																																												.									.	.	.	.	.
Alig confidence																																																												.									.	.	.	.	.
Template Conservation
Template Sequence		X	K	P	T	L	F	V	L	A	A	G	X	G	S	R	Y	G	S	L	K	Q	L	D	G	I	G	P	G	G	D	T	I	X	D	Y	S	V	Y	D	A	I	R	A	G	F	G	R	L	V	F	V	I	R	H	S	F	E	K	E	F	R	E	K	I	L	T	K	Y	E	G	R	I	P	V	E	L	V	F	Q	E
Template Known Secondary structure											T	T		B		T	T	S	S	B							S	T	T	S															T										G	G	G								T					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																	78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	A	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	.	.	.	.	.	.	I	G	L	L	T	V	K	L	D	D	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.											.																			.	.	.	.	.	.
Template Conservation																																		.	.											.
Template Sequence		L	D	R	L	P	E	G	F	S	C	P	E	G	R	E	K	P	W	G	T	N	H	A	V	L	X	G	R	D	A	I	R	.	.	E	P	F	A	V	I	N	A	D	D	.	F	Y	G	R	N	G	F	E	V	L	A	R	K	L	X	T	L	E	G	K	Q	G	E	Y	C	X	V	G	Y	R	V	G	N	T	L
Template Known Secondary structure		T	T				T	T					T	T			S										T	T	T	T	T			.	.	S							S	S		.	B															T	T	T	T		S	S									G	G	G	S
Template Predicted Secondary structure																																		.	.											.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		137	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.
Predicted Secondary structure						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		T	G	Y	G	.	.	.	.	.	.	R	I	T	R	E	N	G	K	V	T	G	I	V	E	H	K	D	A	T	D	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	.	.	.	.	.	.	N
Query Conservation						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	S	G	G	V	S	R	G	V	C	Q	V	D	E	K	H	L	L	T	G	V	V	E	R	T	G	I	E	R	T	D	G	T	I	S	F	R	D	E	T	G	K	I	C	T	L	A	E	D	A	P	V	S	X	N	X	W	G	F	T	P	D	Y	F	D	Y	S	E	E	L	F	I	N	F	L	N	A	H	G
Template Known Secondary structure		B	T	T	B											T	T	S	B														T	T							T	T	S							T	T												T																		T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	.	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L	E	R	V	Y	Q	S	E	Q	A	E
Query Conservation																						.
Alig confidence																						.														.	.
Template Conservation																																				.	.
Template Sequence		Q	E	P	K	S	E	F	F	I	P	F	V	V	N	D	L	I	R	S	G	R	A	S	V	E	V	L	D	T	T	A	R	W	F	.	.	G	V	T	Y	S	D	D	R	P	G	V	V	A	K	L	R	E	L	T	E	A
Template Known Secondary structure		T		S	S																T	S									S				B	.	.			S	S	G	G	G														T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions