Job Description P0ACC7 Confidence 99.56% Date Thu Jan 5 11:17:54 GMT 2012 Rank 102 Aligned Residues 193 % Identity 17% Template c3okrC_ PDB info PDB header:transferase Chain: C: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd) Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	S	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	D	L	P	K	V	L	H	T	L	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	L	K	Q	A	L	K	D	D	N	L	N	W	V	L	Q	A	E	Q	L	G	T	G	H
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.
Template Sequence		E	V	V	A	I	V	P	A	.	.	.	.	.	.	.	.	.	.	.	P	K	A	F	Y	Q	L	D	G	Q	T	L	I	E	R	A	V	D	G	L	L	D	S	G	V	V	D	T	V	V	V	A	V	P	A	D	R	T	D	E	A	R	Q	I	L	G	H	R	A	M	I	V	A	G	V	.	.	.	.	.	.
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.			T	T				T	T														T	S											S	S	S								S		S	S	S							.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.												.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	Q	Q	A	A	P	F	F	A	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	I	G	L	L	T	V	K	L	D	D	P	T	G	Y	G	R	I	T	R	E	N	G	K	V	T	G	I	V	E	H	K	D	A	T	D	E	Q	R	Q
Query Conservation
Alig confidence		.	.																																															.	.																									.	.	.	.	.	.
Template Conservation		.	.																																															.	.																									.	.	.	.	.	.
Template Sequence		.	.	N	L	A	L	T	V	L	S	E	P	E	F	V	L	V	H	D	A	A	R	A	L	T	P	P	A	L	V	A	R	V	V	E	A	L	R	D	G	Y	A	A	V	V	P	V	L	.	.	P	L	S	D	T	I	K	A	V	D	A	N	G	V	V	L	G	T	P	E	R	A	G	L	.	.	.	.	.	.
Template Known Secondary structure		.	.						S					S							T	T		T	T														T	T	T		S							.	.			S	S							T	T	S								S	S			.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																															.	.																									.	.	.	.	.	.
Template SS confidence
				88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L	E	R	V	Y	Q
Query Conservation
Alig confidence		.	.																				.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation		.	.																				.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		.	.	R	A	V	Q	T	P	Q	G	F	T	T	D	L	L	L	R	S	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	D	D	A	S	L	V	E	H	I	G	G	Q	V	Q	V	V	D	G	D	P	L	A	F	.	.	K	I	T	T	K	L	D	L	L	L	A	Q	A	I	V	R
Template Known Secondary structure		.	.					S															.	.	.	.	.	.	.	.	.	.	.	.				S								T										G	G	G		.	.				S												T
Template Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
				161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.													180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions