Job Description P0ACC7 Confidence 98.00% Date Thu Jan 5 11:17:54 GMT 2012 Rank 116 Aligned Residues 131 % Identity 21% Template c3ogzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-sugar pyrophosphorylase; PDBTitle: protein structure of usp from l. major in apo-form Resolution 2.03 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.						70	.	.
Predicted Secondary structure																														.	.	.																					.	.								.												.	.	.	.	.
Query SS confidence																														.	.	.																					.	.								.												.	.	.	.	.
Query Sequence		N	A	M	S	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	D	L	P	K	V	L	H	T	L	A	.	.	.	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	.	.	H	L	V	Y	G	H	G	.	G	D	L	L	K	Q	A	L	K	D	D	.	.	.	.	.	N	L	N
Query Conservation																														.	.	.																					.	.								.												.	.	.	.	.
Alig confidence																														.	.	.																					.	.								.												.	.	.	.	.
Template Conservation
Template Sequence		C	K	T	V	F	V	L	V	A	G	G	L	G	E	R	L	G	Y	S	S	I	K	V	S	L	P	V	E	T	A	T	N	T	T	Y	L	A	Y	Y	L	R	W	A	Q	R	V	G	G	K	E	V	P	F	V	I	M	T	S	D	D	T	H	D	R	T	L	Q	L	L	R	E	L	Q	L	E	V	P	N	L	H
Template Known Secondary structure		G	G												G	G	G	T					G	G	G	S	B	S		T	T	T			B															T	T									T	T	T											T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		73	.	.	.	.																							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.												.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	V	L	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	.	.	.	.	.	.	.	.	.	.	.	A	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																					.
Template Sequence		V	L	K	Q	G	Q	V	F	C	F	A	D	S	A	A	H	L	A	L	D	E	T	G	K	L	L	R	K	P	H	G	H	G	D	V	H	S	L	I	Y	N	A	T	V	A	Q	P	L	V	N	D	W	L	A	A	G	Y	E	S	I	V	F	I	Q	D	T	N	.	A	G	A	T	I	T	I	P	I	S	L	A
Template Known Secondary structure											B	S	S	T	T			B		B		T	T	S	S	B							T	T										B				B								T	T									T	T	B	.	T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	P	Q	G	G	I	G	L	L	T	V	K	L	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	E	H	S	L	D	M	N	F	T	C	I	P	R
Template Known Secondary structure						T	T		S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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