Job Description P0ACC7 Confidence 99.85% Date Thu Jan 5 11:17:54 GMT 2012 Rank 61 Aligned Residues 216 % Identity 16% Template c3f1cB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative 2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from listeria monocytogenes Resolution 2.30 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																					.	.	.	.	.	.																					.	.
Query SS confidence																																																					.	.	.	.	.	.																					.	.
Query Sequence		V	V	I	L	A	A	G	K	G	T	R	M	Y	S	D	L	P	K	V	L	H	T	L	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	.	.	.	.	.	.	G	D	L	L	K	Q	A	L	K	D	D	N	L	N	W	V	L	Q	A	E	.	.	Q
Query Conservation																																																					.	.	.	.	.	.																					.	.
Alig confidence														.	.	.	.																																				.	.	.	.	.	.																					.	.
Template Conservation														.	.	.	.
Template Sequence		A	Q	I	L	A	G	M	G	N	V	S	M	.	.	.	.	P	K	Q	F	L	P	L	N	G	K	P	I	I	V	H	T	V	E	K	F	I	L	N	T	R	F	D	K	I	L	I	S	S	P	K	E	W	M	N	H	A	E	D	N	I	K	K	Y	I	S	D	D	R	I	V	V	I	E	G	G	E	D	R	N
Template Known Secondary structure									T	T	T	S		.	.	.	.		G	G	G	S			T	T													T		T	T		S								G	G	G															T	T								S	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	A	.	.	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	I	G	L	L	T	V	K	L	D	D	P	T	G	Y	G	R	I	T	R	E	N	G	K	V	T	G	I	V	E	H	K	D
Query Conservation																	.	.
Alig confidence																	.	.																																										.	.	.
Template Conservation																																																												.	.	.
Template Sequence		E	T	I	M	N	G	I	R	F	V	E	K	T	Y	G	L	T	D	D	D	I	I	V	T	H	D	A	V	R	P	F	L	T	H	R	I	I	E	E	N	I	D	A	A	L	E	T	G	A	V	D	T	V	I	E	A	L	D	.	.	.	T	I	V	E	S	S	N	H	E	V	I	T	D	I	P	V	R	D	H
Template Known Secondary structure															T				T	T								T	T		T	T																T	S									S	S	.	.	.				B		S	S	S	S	S			B				G	G	G
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	D	E	Q	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L	E	R
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.																					.	.	.																																		.	.
Template Conservation			.	.	.	.	.	.	.	.																					.	.	.																																		.	.
Template Sequence		M	.	.	.	.	.	.	.	.	Y	Q	G	Q	T	P	Q	S	F	N	M	K	K	V	F	N	H	Y	Q	N	.	.	.	L	T	P	E	K	K	Q	I	L	T	D	A	C	K	I	C	L	L	A	G	D	D	V	K	L	V	K	G	E	I	F	N	I	.	.	K	I	T	T	P	Y	D	L	K	V	A	N	A
Template Known Secondary structure			.	.	.	.	.	.	.	.																				T	.	.	.	S																			T										T	T			.	.				S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																					.	.	.																																		.	.
Template SS confidence
		162									.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.
		238	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	Q	S	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	Q	E	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions