Job Description P0ACC7 Confidence 99.94% Date Thu Jan 5 11:17:54 GMT 2012 Rank 34 Aligned Residues 217 % Identity 19% Template c2xwlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: crystal structure of ispd from mycobacterium smegmatis in complex2 with ctp and mg Resolution 1.49 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		V	V	I	L	A	A	G	K	G	T	R	M	Y	S	D	L	P	K	V	L	H	T	L	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	.	.	D	L	L	K	Q	A	L	K	D	D	N	L	N	W	V	L	Q	A	E	Q	L	G	T	G	H	A
Query Conservation																																																						.	.
Alig confidence																																																						.	.																				.	.
Template Conservation																																																																											.	.
Template Sequence		A	V	V	P	A	A	G	S	G	E	R	L	R	A	G	R	P	K	A	F	V	T	L	G	G	T	P	L	L	E	H	A	L	S	G	L	R	A	S	G	V	I	D	R	I	V	I	A	V	P	P	A	L	T	D	E	S	K	L	V	F	G	G	E	D	S	V	I	V	S	G	G	V	.	.	D	R	T	E	S
Template Known Secondary structure											T	T	T	T	S	S	S		G	G	G	S			T	T														T	S											G	G	G										B	T	T								S	.	.	S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	Q	A	A	P	F	F	A	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	I	G	L	L	T	V	K	L	D	D	P	T	G	Y	G	R	I	T	R	E	N	G	K	V	T	G	I	V	E	H	K	D	A	T	D	E	Q	R	Q	I
Query Conservation
Alig confidence																																																					.	.																					.	.	.	.	.	.	.
Template Conservation																																																					.	.																					.	.	.	.	.	.	.
Template Sequence		V	A	L	A	L	E	A	A	G	D	A	E	F	V	L	V	H	D	A	A	R	A	L	T	P	P	A	L	I	A	R	V	V	A	A	L	K	E	G	H	S	A	V	V	P	G	L	A	P	A	D	.	.	T	I	K	A	V	D	A	N	G	A	V	L	G	T	P	E	R	A	G	L	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	S		S		S							T	T		T	T																T		S									S	S	.	.							T	T	S								G	G	G		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.																					.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L	E	R	V	Y	Q	S	E	Q	A
Query Conservation
Alig confidence		.																				.	.	.	.	.	.																																.	.
Template Conservation		.																				.	.	.	.	.	.																																.	.
Template Sequence		.	R	A	V	Q	T	P	Q	G	F	H	A	D	V	L	R	R	A	Y	A	.	.	.	.	.	.	R	A	T	A	G	G	V	T	D	D	A	S	L	V	E	Q	L	G	T	P	V	Q	I	V	D	G	D	P	L	A	F	.	.	K	I	T	T	P	L	D	L	V	L	A	E	A	V	L	A	H	H	H	H
Template Known Secondary structure		.					S														T	.	.	.	.	.	.	T			S	S	S										T	T	T										G	G	G		.	.				S
Template Predicted Secondary structure		.																				.	.	.	.	.	.																																.	.
Template SS confidence
			154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions