Job Description P0ACC7 Confidence 98.75% Date Thu Jan 5 11:17:54 GMT 2012 Rank 108 Aligned Residues 305 % Identity 19% Template c2i5kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase; PDBTitle: crystal structure of ugp1p Resolution 3.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.
Predicted Secondary structure																													.																		.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																													.																		.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		N	A	M	S	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	D	L	P	K	V	L	H	T	L	.	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	.	.	.	.	.	.	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	L	K	Q	A	L	K	D	D	.	.	.	.	.	N	L
Query Conservation																													.																		.	.	.	.	.	.																							.	.	.	.	.
Alig confidence																													.																		.	.	.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		S	K	L	A	V	L	K	L	N	G	G	L	G	T	S	M	G	C	V	G	P	K	S	V	I	E	V	R	E	G	N	T	F	L	D	L	S	V	R	Q	I	E	Y	L	N	R	Q	Y	D	S	D	V	P	L	L	L	M	N	S	F	N	T	D	K	D	T	E	H	L	I	K	K	Y	S	A	N	R	I	R	I
Template Known Secondary structure		G	T												G	G	G	T					G	G	G	S				T	T																		T	T											T	T	T									G	G	G	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		72	.	.	.	.	.																									.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.
Query Sequence		N	W	V	L	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	L	G	T	G	H	A	M	Q	Q	A	A	P	.	.	.	.	.	.	.	F	F	A	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	.	.	.	I	S	V	E	T	L	Q	R	L
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																		.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																.		.	.	.
Template Conservation																																																																				.
Template Sequence		R	S	F	N	Q	S	R	F	P	R	V	Y	K	D	S	L	L	P	V	P	T	E	Y	D	S	P	L	D	A	W	Y	P	P	G	H	G	D	L	F	E	S	L	H	V	S	G	E	L	D	A	L	I	A	Q	G	R	E	I	L	F	V	S	N	G	D	N	.	L	G	A	T	V	D	L	K	I	L	N	H	M
Template Known Secondary structure														T	T	T		S	B				S	T	T	S		G	G	G						T	T	T								T	T								T	T									T	T	B	.	S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.																										.	.	.
Query SS confidence																																															.	.	.	.	.	.	.																										.	.	.
Query Sequence		R	D	A	K	P	Q	G	G	I	G	L	L	T	V	K	L	D	D	P	T	G	Y	G	R	I	T	R	E	N	G	K	V	T	G	I	V	E	H	K	D	A	T	D	E	Q	.	.	.	.	.	.	.	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	.	.	.
Query Conservation																																															.	.	.	.	.	.	.																										.	.	.
Alig confidence																																.	.														.	.	.	.	.	.	.																										.	.	.
Template Conservation																																.	.
Template Sequence		I	E	T	G	A	E	Y	I	M	E	L	T	D	K	T	R	A	D	V	K	G	G	T	L	I	S	Y	D	G	Q	.	.	V	R	L	L	E	V	A	Q	V	P	K	E	H	I	D	E	F	K	N	I	R	K	F	T	N	F	N	T	N	N	L	W	I	N	L	K	A	V	K	R	L	I	E	S	S	N	L	E
Template Known Secondary structure				T	T		S										T	T		T	T	S							T	T		.	.						G	G	G	S		T	T	T							T	T	T																						T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
						188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L	E	R	V	Y	Q	S	E	Q	A	E	K	L	L	L	A	G	V	M	L	R	D	P	A	R	F	D	L	R
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																	.
Template Conservation																																						.
Template Sequence		M	E	I	I	P	N	Q	K	T	I	N	V	L	Q	L	E	T	A	C	G	A	A	I	R	H	F	D	G	A	H	G	V	V	V	P	R	.	S	R	F	L	P	V	K	T	C	S	D	L	L	L	V	K	S	D	L	F	R	L	E	H	G	S	L	K	L	D	P	S	R	F	G	P	N	P	L	I	K	L	G
Template Known Secondary structure																				G	G	G	G	G	G	G	S	T	T								G	.	G	G			B			S							T	T	S	T	T					T	T						S	S			S	S
Template Predicted Secondary structure																																						.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		264																							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	T	H	G	R	D	V	E	I	D	T	N	V	I	I	E	G	N	V	T	L	G	.	.	.	.	H	R	V	K	I	G	T	G	C	V	I	K	N	S	V	I	G	D	D	C	E	I	S	P	Y
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		S	H	F	K	K	V	S	G	F	N	A	R	I	P	H	I	P	K	I	V	E	L	D	H	L	T	I	T	G	N	V	F	L	G	K	D	V	T	L	R	G	T	V	I	I	V	C	S	D	G	H	K	I	D	I	P	N	G	S	I	L	E	N	V	V	V	T	G	N	L	Q	I	L	E	H
Template Known Secondary structure		G	G	G	S	S									S	S														S	S					T	T													T	T							T	T										S		B
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions