Job Description P0ACC7 Confidence 57.47% Date Thu Jan 5 11:17:54 GMT 2012 Rank 127 Aligned Residues 187 % Identity 12% Template c2d7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ Resolution 2.50 Å

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		27	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure											.	.															.	.	.	.								.	.	.	.	.														.
Query SS confidence											.	.															.	.	.	.								.	.	.	.	.														.
Query Sequence		L	H	T	L	A	G	K	A	M	.	.	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	.	.	.	.	H	V	H	L	V	Y	G	.	.	.	.	.	H	G	G	D	L	L	K	Q	A	L	K	D	D	.	N	L	N	W	V	L	Q	A	E	Q	L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	A
Query Conservation											.	.															.	.	.	.								.	.	.	.	.														.
Alig confidence											.	.															.	.	.	.								.	.	.	.	.														.
Template Conservation
Template Sequence		I	I	P	F	H	N	E	G	W	S	S	L	L	R	T	V	H	S	V	L	N	R	S	P	P	E	L	V	A	E	I	V	L	V	D	D	F	S	D	R	E	H	L	K	K	P	L	E	D	Y	M	A	L	F	P	S	V	R	I	L	R	T	K	K	R	E	G	L	I	R	T	R	M	L	G	A	S	V	A	T
Template Known Secondary structure						S	S																	S		G	G	G										S				G	G	G	T								T	T	S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.															.	.	.	.	.
Predicted Secondary structure																																										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	I	G	L	L	T	V	K	L	D	.	.	D	P	T	G	Y	G	R	I	T	R	E	N	G	K	V	T	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	K	D	A
Query Conservation																																										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.												.																												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.												.
Template Sequence		.	G	D	V	I	T	F	L	D	S	H	C	.	E	A	N	V	N	W	L	P	P	L	L	D	R	I	A	R	N	R	K	T	I	V	C	P	M	I	D	V	I	D	H	D	D	F	R	Y	E	T	Q	A	G	D	A	M	R	G	A	F	D	W	E	M	Y	Y	K	R	I	P	I	P	P	E	L	Q	K	A	D
Template Known Secondary structure		.	S	S							S	S		.				T	T		S											T	T												T	T	T							T	T	S	S							T	T										T	T	T			S	S
Template Predicted Secondary structure		.												.
Template SS confidence
			230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	E	Q	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	R	E	I	V	A	V	H
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		P	S	D	P	F	E	S	P	V	M	A	G	G	L	F	A	V	D	R	K	W	F	W	E	.	L	G	G	Y	D	P	G	L	E	I	W	G	G	E	Q	Y	E	I	S	F	K	V	W	M	C	G	G	R	M	E	D	I	P
Template Known Secondary structure		T	T	S					S	S			S	S	S											.	T	T	S	S		T	T			S	S	S	S												T	T
Template Predicted Secondary structure																										.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions