Job Description P0ACC7 Confidence 100.00% Date Thu Jan 5 11:17:54 GMT 2012 Rank 22 Aligned Residues 270 % Identity 17% Template c2cu2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative mannose-1-phosphate guanylyl transferase; PDBTitle: crystal structure of mannose-1-phosphate geranyltransferase from2 thermus thermophilus hb8 Resolution 2.20 Å

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		6	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure				.	.															.	.	.	.												.														.
Query SS confidence				.	.															.	.	.	.												.														.
Query Sequence		M	S	.	.	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	.	.	.	.	D	L	P	K	V	L	H	T	L	A	G	.	K	A	M	V	Q	H	V	I	D	A	A	N	E	.	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	L	K	Q	A	L	K	D	D	N	L	N	W	V	L	Q	A
Query Conservation				.	.															.	.	.	.												.														.
Alig confidence				.	.															.	.	.	.												.														.																								.
Template Conservation																																																																									.
Template Sequence		M	K	T	Y	A	L	V	M	A	G	G	R	G	E	R	L	W	P	L	S	R	E	D	R	P	K	P	F	L	P	L	F	E	G	K	T	L	L	E	A	T	L	E	R	L	A	P	L	V	P	P	E	R	T	L	L	A	V	R	R	D	Q	E	A	V	A	R	P	Y	A	D	.	G	I	R	L	L	L	E	P
Template Known Secondary structure															G	G	G	T	T	T		B	T	T	B		G	G	G		B		G	G	G		B										T	T	T	S		G	G	G							G	G	G					G	G	G		S	.	S	S						S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																																.	.	.	.	.																							.	.	.
Query SS confidence																			.	.																																.	.	.	.	.																							.	.	.
Query Sequence		E	Q	L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	A	.	.	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	.	.	.	.	.	I	G	L	L	T	V	K	L	D	D	P	T	G	Y	G	R	I	T	R	E	N	G	.	.	.
Query Conservation																			.	.																																.	.	.	.	.																							.	.	.
Alig confidence																			.	.																																.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		L	G	R	D	T	A	G	A	V	L	L	G	V	A	E	A	L	K	E	G	A	E	R	L	L	V	L	P	A	D	H	Y	V	G	D	D	E	A	Y	R	E	A	L	A	T	M	L	E	A	A	E	E	G	F	V	V	A	L	G	L	R	P	T	R	P	E	T	E	Y	G	Y	I	R	L	G	P	R	E	G	A
Template Known Secondary structure		S																			T		S							S	S				S																		T	T										S	S			S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
				148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.
Predicted Secondary structure		.	.																				.	.	.																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																				.	.	.																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	K	V	T	G	I	V	E	H	K	D	A	T	D	E	Q	R	Q	I	Q	.	.	.	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	.	.	.	.	.	.	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	.	.	.	.	.	.	.	.	.	Y	Q
Query Conservation		.	.																				.	.	.																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																				.	.	.																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	Y	R	G	E	G	F	V	E	K	P	S	Y	A	E	A	L	E	Y	I	R	K	G	Y	V	W	N	G	G	V	F	A	F	A	P	A	T	M	A	E	L	F	R	R	H	L	P	S	H	H	E	A	L	E	R	L	L	A	G	A	S	L	E	E	V	Y	A	G	L	P	K	I	S	I	D	Y	G	V	M	E
Template Known Secondary structure																							T	T																																			T	T									T	S									T	G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L	E	R	V	Y	Q	S	E	Q	A	E	K	L	L	L	A	G	V	M	L	R	D	P	A	R	F	D	L	R	G	T	L	T	H	G	R	D	V	E	I	D	T	N	V	I	I	E	G	N	V	T	L	G
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		K	A	E	R	V	R	V	V	L	G	R	F	P	W	D	D	V	G	N	W	R	A	L	E	R	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	D	P	H	E	N	V	V	L	G	E	G	R	H	V	A	L	D	T	.	.	.	F	G	C	V	V	Y
Template Known Secondary structure		G		S	S								S							S	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		T	T	S					S	S	S						S		.	.	.	B	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.																									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	V	K	I	G	T	G	C	V	I	K	N	S	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	R	G	V	V	A	T	L	G	V	S	G	L	V	V
Template Known Secondary structure			S	S	S						S		B	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions