Job Description P0ACC7 Confidence 99.95% Date Thu Jan 5 11:17:54 GMT 2012 Rank 29 Aligned Residues 217 % Identity 13% Template c1jylC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ctp:phosphocholine cytidylytransferase; PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc) Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																			.	.	.																																																										.	.
Query SS confidence																			.	.	.																																																										.	.
Query Sequence		A	M	S	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	.	.	.	D	L	P	K	V	L	H	T	L	A	G	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	G	D	L	L	K	Q	A	L	K	D	D	N	L	N	W	V	L	Q	A	E	.	.	Q
Query Conservation																			.	.	.																																																										.	.
Alig confidence																			.	.	.																																																										.	.
Template Conservation
Template Sequence		R	V	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	T	E	N	T	P	K	A	L	V	Q	V	N	Q	K	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	K	E	Q	F	D	Y	L	K	E	K	Y	G	V	R	L	V	F	N	D	K	Y	A	D
Template Known Secondary structure											S			G	G	G	T	T	T	T	S	S	S		G	G	G		B	S	S	S	S	B												T	T										T	T	G	G	G	G															T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	A	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	P	Q	G	G	I	G	L	L	T	V	K	L	D	D	P	T	G	Y	G	R	I	T	R	E	N	G	K	V	T	G	I	V	E	H	K	D	A	T
Query Conservation
Alig confidence																.	.	.																	.	.	.	.	.																																									.	.
Template Conservation																.	.	.																	.	.	.	.	.																																									.	.
Template Sequence		Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	.	.	.	A	N	S	Y	V	I	D	A	D	N	Y	L	F	K	N	M	.	.	.	.	.	F	R	N	D	L	T	R	S	T	Y	F	S	V	Y	R	E	D	C	T	N	E	W	F	L	V	Y	G	D	D	Y	K	V	Q	D	I	I	V	D	S	K	.	.
Template Known Secondary structure		S		T							T	G	G	G		.	.	.	T	T						S	S				S	S			.	.	.	.	.			S				S																					T	T		B										.	.
Template Predicted Secondary structure																.	.	.																	.	.	.	.	.																																									.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																						.	.	.																																									.
Query SS confidence																						.	.	.																																									.
Query Sequence		D	E	Q	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	.	.	.	M	K	R	W	L	A	K	L	T	N	N	N	A	Q	G	E	Y	Y	I	T	D	I	I	A	L	A	Y	Q	E	G	R	E	I	V	A	V	H	P	Q	R	.	L	S	E	V	E	G	V	N	N	R	L	Q	L	S	R	L
Query Conservation																						.	.	.																																									.
Alig confidence		.	.	.	.	.																.	.	.																													.												.				.	.
Template Conservation		.	.	.	.	.																																															.																.	.
Template Sequence		.	.	.	.	.	A	G	R	I	L	S	G	V	S	F	W	D	A	P	T	A	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D	L	Y	W	D	N	M	V	K	D	N	I	K	.	E	L	D	V	Y	V	E	E	L	E	G	N	S	I	Y	.	.	E	I	D	S	V	Q	D	Y	R	K	L
Template Known Secondary structure		.	.	.	.	.							S																							S			S	S			T	T					T	S	G	G	.	G										S	S				.	.			S	S
Template Predicted Secondary structure		.	.	.	.	.																																															.																.	.
Template SS confidence
							155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.
		236	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	I	L
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions