Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACC7
Confidence100.00%DateThu Jan 5 11:17:54 GMT 2012
Rank3Aligned Residues446
% Identity40%Templatec1hm8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:udp-n-acetylglucosamine-1-phosphate uridyltransferase; PDBTitle: crystal structure of s.pneumoniae n-acetylglucosamine-1-phosphate2 uridyltransferase, glmu, bound to acetyl coenzyme a
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  VVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQ
Query Conservation 




 
 
 

 
  

 



 
 


   
  
   
   
 

       
   
    
  
      

  

 
Alig confidence 




























































.

















Template Conservation 




 
 
 
  
  

 



 
 


 
 
  
   
   
 

       
   
  .           

  

 
Template Sequence  AIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG. QTEFVTQSEQLGTGHAVM
Template Known Secondary structure 



GGG

SS
GGGSTTTT

S
TT


.S


S


Template Predicted Secondary structure 

























.







Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60..... ....70.........80...
 
   88.90..... ....100.........110.........120... ......130......... 140.........150.........160...
Predicted Secondary structure 


.





..






.











Query SS confidence 







.



























. .















.























Query Sequence  QAAPFFAD. DEDILMLYGDVPLISVETLQRLRDAKPQ. . GGIGLLTVKLDDPTGY. GRITRENGKVTGIVEHKDATDEQR
Query Conservation       
  .    

   
   
    
         ..    
           .         
    
         
Alig confidence 







.



























..















.























Template Conservation               


  
   
                   

                     
    
         
Template Sequence  MTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDNAEVLRIVEQKDATDFEK
Template Known Secondary structure  TTSS

STT
TT

T
S
S

TTS

TT


TTT

Template Predicted Secondary structure 






































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  QIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQ
Query Conservation         
 
      
                   
    
      
                   
           
Alig confidence 















































































Template Conservation         


      
                   
           
                   
           
Template Sequence  QIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRI
Template Known Secondary structure  T

TTSSS


T

S
GGGG



S
Template Predicted Secondary structure 



























Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  AEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAA
Query Conservation                        
 

    
     
     

    
                               
Alig confidence 

































































.












Template Conservation                    
   
 

    
     
     

    
                 .             
Template Sequence  NHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVI. TNSMIEESSVADG
Template Known Secondary structure  TT
S
GGG

TT

TT

SS
SS

TT

TT
S

TT
.
S
S

TT
Template Predicted Secondary structure 














































.








Template SS confidence 















































































   244.....250.........260.........270.........280.........290.........300......... 310.........320..
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  CTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFV
Query Conservation                      
     
  
 
   
 

    
  



 

 

    
 
          


   
Alig confidence 















































































Template Conservation                      
     
  
 
     

    
  



 

 

   

 
          


   
Template Sequence  VTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFV
Template Known Secondary structure 

SS

SS

TT
S

TT
S
TT

TT

BSSS
B


TT
Template Predicted Secondary structure 



















































Template SS confidence 















































































   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   404.....410.........420.........430.........440.........450.....
Predicted Secondary structure 



































Query SS confidence 



















































Query Sequence  GSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWRRPVKK
Query Conservation 
    
  

 

    
 


 
  

     
                  
Alig confidence 



















































Template Conservation 
    
   
 

    
  
  
  


    
 
                
Template Sequence  GSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEYATRLPH
Template Known Secondary structure 
TT
SS
TT

TT

S
B
TT









TTGGGGSTT
Template Predicted Secondary structure 































Template SS confidence 



















































   403......410.........420.........430.........440.........450....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions