Job Description P23522 Confidence 99.80% Date Wed Jan 25 15:20:43 GMT 2012 Rank 24 Aligned Residues 212 % Identity 15% Template d1vbga1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 2.30

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50											.	.	.	.	.	.												.	.	.	60	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	A	K	Q	V	Q	I	G	C	W	S	A	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	.	.	.	.	.	.	.	.	W	L	V	L	D	G	E	H	.	.	.	.	.	.	.	.	.	.	A	P	N	D	I	S	.	.	.	.	.	.	.	.	.	.	.	T	F	I	P	Q	L	M	A
Query Conservation																															.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	V	D	D	V	R	K	L	K	V	L	A	N	A	D	T	P	D	D	A	L	T	A	R	N	N	G	A	Q	G	I	G	L	C	R	T	E	H	M	F	F	A	S	D	E	R	I	K	A	V	R	Q	M	I	M	A	P	T	L	E	L	R	Q	Q	A	L	D	R	L	L	P	Y	Q	R	S	D	F	E	G	I
Template Known Secondary structure									S							S	S										T	T			S											T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
		65	.	.		.	.	70	.	.	.	.	.	.	.	.																																																										.	80	.	.	.	.	.	.
Predicted Secondary structure					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	G	.	S	A	S	A	P	V	V	R	V	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	P	V	I	I	K	R
Query Conservation					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	A	M	D	G	L	P	V	T	I	R	L	L	D	P	P	L	H	E	F	L	P	E	G	N	I	E	D	I	V	S	E	L	C	A	E	T	G	A	N	Q	E	D	A	L	A	R	I	E	K	L	S	E	V	N	P	M	L	G	F	R	G	C	R	L	G	I	S	Y	P	E	L	T	E	M	Q	A	R	A
Template Known Secondary structure					T	T	T	S									S		G	G	G	G	S			S																														S		G	G	G	S	S		T							S
Template Predicted Secondary structure
Template SS confidence
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Query Sequence		L	L	D	I	G	F	Y	N	.	.	.	.	.	.	.	.	.	.	F	L	I	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	.	.	.	.	.	.	N	K	N	I	T	I	L	V
Query Conservation										.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	E	A	A	I	A	M	T	N	Q	G	V	Q	V	F	P	E	I	M	V	P	L	V	G	T	P	Q	E	L	G	H	Q	V	T	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	V	A	E	K	V	F	A	N	V	G	K	T	I	G	Y	K	V	G	T
Template Known Secondary structure											T	T	T											S			S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.																							.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.																							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	E	S	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	.	L	G	H	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S
Query Conservation																																			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		M	I	E	I	P	R	A	A	L	V	A	D	E	I	A	E	.	.	Q	A	E	F	F	S	F	G	T	N	D	L	T	Q	M	T	F	G	Y	S	R	D	D	V	G	K	F	I	P	V	Y	L	A	Q	G	I	L	Q	H	D	P	F	E	V	L	D	Q	R	G	V	G	E	L	V	K	F	A	T	E	R	G	R
Template Known Secondary structure					S						T					T	T	.	.	T		S															T			T	T	T	G	G	G	T							T	T	S		S	S		T	T	T	S			T	T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		748	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.			.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
		208	.			210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.									.	.	.
Query SS confidence				.	.									.	.	.
Query Sequence		A	H	.	.	G	K	P	S	G	I	L	A	.	.	.	P	V	E	A	D	A	R	R	Y	L	E	W	G	A	T	F	V	A	V	G	S	D	L	G	V	F	R	S	A	T	Q	K
Query Conservation				.	.									.	.	.
Alig confidence				.	.									.	.	.
Template Conservation
Template Sequence		K	A	R	P	N	L	K	V	G	I	C	G	E	H	G	G	E	P	S	S	V	A	F	F	A	K	A	G	L	D	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A
Template Known Secondary structure				S	T	T							S	G	G	G	G	S										T	T		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions