Return to main results Retrieve Phyre Job Id

Job DescriptionP23522
Confidence92.92%DateWed Jan 25 15:20:43 GMT 2012
Rank118Aligned Residues203
% Identity16%Templated1oy0a_
SCOP infoTIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Ketopantoate hydroxymethyltransferase PanB
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40....... ..50. ........60.........70.. .
Predicted Secondary structure 















.........



.






.
Query SS confidence 










































. . . . . . . . .



.




















.
Query Sequence  VFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLD. . . . . . . . . GEHA. PNDISTFIPQLMALKGSASAP. V
Query Conservation     
  
  
  
    
      

   
  
  
 
 
 

......... 

 .          
 
    
   . 
Alig confidence 
















..























.........



.




















.
Template Conservation   
   
   
  
  
 ..  



  

 
 
 

 
 





     

  

  

  

  
  

 

     
Template Sequence  IRTHHLQRWKADGHKWA. . MLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALV
Template Known Secondary structure 

T

..

STTT


TTTT

SSSSS

GGGT
TTS
Template Predicted Secondary structure 





..
























Template SS confidence 















































































   21........30....... ..40.........50.........60.........70.........80.........90........
 
   74 .....80. ....... .90.........100.........110.........120.........130.........140...
Predicted Secondary structure  .




.........
































Query SS confidence 
.






. . . . . . . .






.






















































Query Sequence  V. RVPTNEP. . . . . . . . VIIKRLL. DIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSN
Query Conservation 
.

     ........  
   
.
 

 




 
 




   
 
  


 
 

                    
Alig confidence 
.






........






.






















































Template Conservation 








  
   

 

 
   



 






      
  
   



 







  
   
  
 
 



Template Sequence  VADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPGDAAEQTIADAIAVAEAG
Template Known Secondary structure 

TTSSTT
TT

SBSGGGT





T
Template Predicted Secondary structure 




























Template SS confidence 















































































   99100.........110.........120.........130.........140.........150.........160.........170........
 
   144.....150.........160... ......170.........180.........190.........200.........
Predicted Secondary structure 




.......

















Query SS confidence 



















. . . . . . .













































Query Sequence  KNITILVQIESQQGVDNVDA. . . . . . . IAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAH
Query Conservation      

  


  

 
  
.......







 
 

  


  

       
 
  
   
  

   
Alig confidence 



















.......













































Template Conservation 
  



 

  

  

    








  






  
 

      


 
 
         
   
Template Sequence  AFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDGQVLVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQY
Template Known Secondary structure 
SS


SS
SS
S
SS
TT
S
S


TT





Template Predicted Secondary structure 

























Template SS confidence 








































































   193......200.........210.........220.........230.........240.........250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions