Job Description P23522 Confidence 99.85% Date Wed Jan 25 15:20:43 GMT 2012 Rank 19 Aligned Residues 191 % Identity 17% Template c3pugA_ PDB info PDB header:transferase Chain: A: PDB Molecule:malate synthase; PDBTitle: haloferax volcanii malate synthase native at 3mm glyoxylate Resolution 2.70 Å

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		23	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																	.	.	70	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.												.	.	.	.													.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.												.	.	.	.													.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	W	S	A	L	S	.	.	.	.	.	.	N	P	I	S	T	E	V	L	G	L	A	.	.	.	.	G	F	D	W	L	V	L	D	G	E	H	A	.	.	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	S	A	P	V	V
Query Conservation								.	.	.	.	.	.												.	.	.	.													.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.												.	.	.	.													.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	F	T	S	P	T	A	V	E	D	D	S	A	K	M	L	R	R	A	A	G	L	R	G	M	Q	A	P	D	V	W	V	P	D	N	E	D	A	T	A	P	S	M	R	D	E	G	A	E	N	I	V	E	V	I	S	E	Q	G	A	E	F	P	G	E	I	H	P	R	M	V	W	H	R	D	S	P	E	T
Template Known Secondary structure								S						T	T							T	T			G	G	G	S		S						S	S	T	T	S		G	G	G																G	G	G			S					B					T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		R	V	P	T	N	E	P	V	I	I	K	R	L	L	D	I	.	.	.	.	G	F	Y	N	F	L	I	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	Q	G	F	Q	H	M	L	D	I	T	D	P	E	R	G	A	V	E	H	I	H	G	F	V	I	P	E	V	G	G	I	D	D	W	K	K	A	D	E	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	V	E	H	E	H	G	L	D	E	G	S	L	A	M	S	V
Template Known Secondary structure													T		G	G	G	S		G	G	G								S			S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T			T	T		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																												.																								.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																												.																								.	.	.	.	.	.
Query Sequence		Q	I	E	S	Q	Q	G	V	D	N	V	D	A	I	A	.	.	.	.	.	.	.	.	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	.	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.																												.																								.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																												.																								.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	E	S	G	E	A	E	L	A	M	G	D	L	R	D	E	M	G	K	P	T	N	N	L	E	R	L	F	L	L	V	D	G	E	V	D	Y	T	K	D	M	R	A	M	T	P	T	G	E	L	P	A	W	P	E	L	R	H	N	T	S	R	G	A	S	A	A	G	C	V	A	V	D	G	P	Y	D	D	I
Template Known Secondary structure					S							G	G	G					T	T	S	T	T			G	G	G															T	T				S	S																					T											T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
				216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	A	P	V	E	A	D	A	R	R	Y	L	E	W	G	A	T
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		R	D	V	E	G	Y	R	E	R	M	T	D	N	Q	A	K	G	M	L
Template Known Secondary structure		T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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