Job Description P23522 Confidence 81.66% Date Wed Jan 25 15:20:43 GMT 2012 Rank 181 Aligned Residues 186 % Identity 16% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.
Predicted Secondary structure																											.	.																																																	.
Query SS confidence																											.	.																																																	.
Query Sequence		P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	D	G	E	H	A	P	N	D	.	.	I	S	T	F	I	P	Q	L	M	A	L	K	G	S	A	S	A	P	V	V	R	V	P	T	N	E	P	V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	T	.	K	E	E	A
Query Conservation																											.	.																																																	.
Alig confidence																											.	.																					.	.	.	.											.	.													.
Template Conservation																																																	.	.	.	.											.	.
Template Sequence		Y	G	Q	V	E	A	G	L	Q	N	G	V	T	L	V	Q	I	R	E	K	D	A	D	T	K	F	F	I	E	E	A	L	Q	I	K	E	L	C	H	A	H	N	V	P	L	I	I	.	.	.	.	N	D	R	I	D	V	A	M	A	I	.	.	G	A	D	G	I	H	V	G	Q	D	D	M	P	I	P	M	I
Template Known Secondary structure										S	S										S	S	S		T	T																T	T						.	.	.	.		S									.	.	T		S						T	T	S	S
Template Predicted Secondary structure																																																	.	.	.	.											.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	E	S	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																	.	.
Template Sequence		R	K	L	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	M	V	I	G	W	S	V	G	F	P	E	E	V	D	E	L	S	K	M	G	P	.	D	M	V	D	Y	I	G	V	G	T	L	F	P	T	L	T	.	.	K
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S								S	T								T	T		T	.	T	S										S			S	S	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																	.	.
Template SS confidence
		102	.	.	.	.																																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.									.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																		.										.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																																		.										.	.	.	.	.	.	.	.																.	.	.
Query Sequence		L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	L	A	P	.	V	E	A	D	A	R	R	Y	L	.	.	.	.	.	.	.	.	E	W	G	A	T	F	V	A	V	G	S	D	L	G	V	.	.	.	F	R	S	A	T	Q	K	L	A	D	T	F
Query Conservation																																		.										.	.	.	.	.	.	.	.																.	.	.
Alig confidence																																		.										.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		K	N	K	K	M	G	T	A	G	A	I	R	V	L	D	A	L	E	R	N	N	A	H	W	C	R	T	V	G	I	G	G	L	H	P	D	N	I	E	R	V	L	Y	Q	C	V	S	S	N	G	K	R	S	L	D	G	I	C	V	V	S	D	I	I	A	S	L	D	A	A	K	S	T	K	I	L	R	G	L	I
Template Known Secondary structure																					T	T		T	T							S	S			T	T	T									B		T	T	S			B		S					S	T	T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		255	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		230	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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