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Job DescriptionP23522
Confidence95.51%DateWed Jan 25 15:20:43 GMT 2012
Rank99Aligned Residues200
% Identity19%Templatec3labA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative kdpg (2-keto-3-deoxy-6-phosphogluconate) PDBTitle: crystal structure of a putative kdpg (2-keto-3-deoxy-6-2 phosphogluconate) aldolase from oleispira antarctica
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20........ .30.........40.........50.........60.........70........ .80..
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Query Sequence  PNKFKAALAAKQVQIGCWSALS. . . NPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT. NEPV
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Template Sequence  XTQLDTWLANTKPLIPVIVIDDLVHAIPXAKALVAGGVHLLEVTL. . . . . RTEAGLAAISAIKKAVPEAIVGAGTVCTAD
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TTS
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T.....TSTT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  IIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVD
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Template Sequence  DFQKAIDAGAQFIVSPG. LTPELIEKA. . . . . . . . . . . . . . . . . . . . . . . . . . KQVKLDGQWQGVFLPGVATASEVXIAA
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   76...80.........90.. .......100. ........110.........120........
 
   163......170.........180.........190.........200.........210........ .220.........230.........240.
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Query Sequence  AIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP. VEADARRYLEWGATFVAVGSDLG
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Template Sequence  QA. . . . GITQLKCFPA. . . . . . . . . SAIGGAKLLKAWSGPFP. . . . . DIQFCPTGGISKDNYKEYLGLPNVICAGGSWLT
Template Known Secondary structure  T....T

TTT.........TTTTTT
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SGGG
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   129130 .........140 .........150....... ..160.........170.........180.........190
 
   242.......250......
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Query Sequence  . . . . VFRSATQKLADTFKK
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Template Sequence  ESKLLIEGDWNEVTRRASE
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   191........200.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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