Job Description P23522 Confidence 26.24% Date Wed Jan 25 15:20:43 GMT 2012 Rank 433 Aligned Residues 168 % Identity 13% Template c3kw3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from bartonella henselae with2 covalently bound pyridoxal phosphate Resolution 2.04 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	D	G	E	H	A	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	S	A	S	A	P	V	V	R	V	P	T	N	E	P	V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	T	K	E	E	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.																																		.	.				.
Template Conservation																								.	.	.	.	.	.	.	.	.																																		.	.				.
Template Sequence		L	G	A	H	K	I	A	P	A	L	Y	Q	A	G	C	R	T	F	F	V	A	Q	.	.	.	.	.	.	.	.	.	I	E	E	A	L	Q	L	K	A	V	L	P	E	N	V	M	I	A	L	L	N	G	F	P	H	K	A	E	E	F	V	A	Q	.	.	S	G	I	.	I	P	L	L	N	S	W	S	T	I
Template Known Secondary structure		T												T	T							S	S	.	.	.	.	.	.	.	.	.											S		S	S						T	T				T	T								.	.	T	T		.						S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																		.	.				.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110		.	.	.	.	.	.	.	.	.	120
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.										.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.
Query Sequence		E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	E	S	.	.	.	.	.	.	.	.	.	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P
Query Conservation																																																		.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	W	Q	T	L	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	N	K	K	F	P	A	I	I	Q	V	D	T	N	M	S	R	L	G	L	D	K	K	E	L	Q	K	L	I	K	N	P	T	I	F	E	K	A	E	I	K	Y	I	L	S
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T									B		S	S	S		S	S	S	B													T					S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.																											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	L	A	P	V	E	A	D	A	R	R	Y	L	E	W	G	A	T	F	V	A	V	G	S
Query Conservation
Alig confidence		.	.	.	.	.																													.
Template Conservation		.	.	.	.	.																													.
Template Sequence		.	.	.	.	.	H	L	A	N	G	E	D	A	S	H	S	S	N	N	K	Q	L	A	A	F	K	R	V	L	A	Q	L	P	.	T	C	K	V	S	F	A	N	S	G	G	I	F	L	G	S	D	F	Y	F	D	L	V	R	P	G	I
Template Known Secondary structure		.	.	.	.	.			S	S	T	T		S	S		T															T	S		.													T	S		G	G	G		T	T					S	G
Template Predicted Secondary structure		.	.	.	.	.																													.
Template SS confidence
							175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions