Job Description P23522 Confidence 99.57% Date Wed Jan 25 15:20:43 GMT 2012 Rank 32 Aligned Residues 200 % Identity 18% Template c3khdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pff1300w. Resolution 2.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.																.	.	.	.
Query SS confidence																																																						.																.	.	.	.
Query Sequence		V	F	P	N	K	F	K	A	A	L	A	A	K	Q	V	Q	I	G	C	W	S	A	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	D	G	E	H	A	P	N	D	I	S	.	T	F	I	P	Q	L	M	A	L	K	G	S	A	S	A	.	.	.	.	P	V	V	R	V	P	T	N
Query Conservation																																																						.																.	.	.	.
Alig confidence																																																						.																.	.	.	.
Template Conservation
Template Sequence		L	E	P	N	N	V	N	L	R	S	K	K	T	H	I	V	C	T	L	G	P	A	C	K	S	V	E	T	L	V	K	L	I	D	A	G	M	D	I	C	R	F	N	F	S	H	G	S	H	E	D	H	K	E	M	F	N	N	V	L	K	A	Q	E	L	R	P	N	C	L	L	G	M	L	L	D	T	K	E	K
Template Known Secondary structure			S						G	G	G		S	S								T	T	S		S										T									T	T	S	S																				S	S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		E	P	V	I	I	K	R	.	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	E	S	Q	Q	G	V
Query Conservation									.
Alig confidence									.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	N	D	I	L	N	F	A	I	P	M	G	C	N	F	I	A	A	S	F	I	Q	S	A	D	D	V	R	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	L	L	G	P	R	G	R	H	I	K	I	I	P	K	I	E	N	I	E	G	I
Template Known Secondary structure		S	S					T	T					T		S						S			S	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T	S	S	S								S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																											.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.															.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	L	A	P	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																.	.	.	.	.	.	.	.	.
Template Sequence		I	H	F	D	K	I	L	A	.	.	E	S	D	G	I	M	I	A	R	G	D	L	G	S	P	.	.	.	.	.	.	.	.	.	E	K	V	F	L	A	Q	K	L	M	I	S	K	C	N	L	Q	G	K	P	I	I	T	A	T	Q	M	L	E	S	M	T	K	N	P	R	P	T	R	A	E	V	T	D	V	A
Template Known Secondary structure			T							.	.		S	S													.	.	.	.	.	.	.	.	.	T	T																T							S				G	G	G	G	T		S	S
Template Predicted Secondary structure										.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.										.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	L	E	W	G	A	T	F	V	A	V	G	S	D	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	V	L	D	G	T	D	C	V	M	L	S	G	E	T	A
Template Known Secondary structure							T		S					S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions