Job Description P23522 Confidence 97.41% Date Wed Jan 25 15:20:43 GMT 2012 Rank 74 Aligned Residues 212 % Identity 17% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		5	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.
Predicted Secondary structure					.	.																																							.	.	.	.	.	.	.	.	.	.						.																		.	.
Query SS confidence					.	.																																							.	.	.	.	.	.	.	.	.	.						.																		.	.
Query Sequence		V	F	P	.	.	N	K	F	K	A	A	L	A	A	K	Q	V	Q	I	G	C	W	S	A	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	.	.	.	.	.	.	.	.	.	.	L	D	G	E	H	.	A	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	.	.	S	A
Query Conservation					.	.																																							.	.	.	.	.	.	.	.	.	.						.																		.	.
Alig confidence					.	.															.																								.	.	.	.	.	.	.	.	.	.						.																		.	.
Template Conservation																					.
Template Sequence		M	V	T	A	A	T	S	L	R	R	A	L	E	N	P	D	S	F	I	.	V	A	P	G	V	Y	D	G	L	S	A	R	V	A	L	S	A	G	F	D	A	L	Y	M	T	G	A	G	T	A	A	S	V	H	G	Q	A	D	L	G	I	C	T	L	N	D	M	R	A	N	A	E	M	I	S	N	I	S	P	S
Template Known Secondary structure															S	T	T				.							S									T	T	T		S														T	S	S		S	S	S																		S	T	T
Template Predicted Secondary structure																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		S	A	P	V	V	R	V	P	T	N	E	P	.	.	.	.	.	.	V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	.	.	.	.	.	.	.	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A
Query Conservation														.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																		.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	V	I	A	D	A	D	T	G	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S							T	T		S	S	S														T	T									B						B															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	E	S	.	.	.	.	.	.	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.														.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S	V	A	R	L	R	A	A	R	D	A	.	G	A	D	V	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	G	I	T	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P
Template Known Secondary structure								T																															.	T		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T														T	T	T	S
Template Predicted Secondary structure																																							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.																190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		211	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																		.
Query SS confidence														.	.	.																		.
Query Sequence		K	P	S	G	I	L	A	P	V	E	A	D	.	.	.	A	R	R	Y	L	E	W	G	A	T	F	V	A	V	G	S	D	.	L	G	V	F	R	S	A	T	Q	K	L	A	D	T	F	K	K
Query Conservation														.	.	.																		.
Alig confidence														.	.	.																		.
Template Conservation
Template Sequence		L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	A	E	A	K	E	M	G	F	R	I	I	I	F	P	F	A	A	L	G	P	A	V	A	A	M	R	E	A	M	E	K	L	K	R
Template Known Secondary structure		B						T	T	S	S	S												T		S					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions