Job Description P23522 Confidence 95.38% Date Wed Jan 25 15:20:43 GMT 2012 Rank 100 Aligned Residues 162 % Identity 15% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		5	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure					.																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	P	.	N	K	F	K	A	A	L	A	A	K	Q	V	Q	I	G	C	W	S	A	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	.	.	.	.	.	.	.	.	.	.	.	.	D	G	E	H	A	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	S	A	S	A
Query Conservation					.																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.															.	.																								.	.	.	.	.	.	.	.	.	.	.	.			.	.
Template Conservation																				.	.																																						.	.
Template Sequence		M	V	T	V	P	K	L	Q	A	M	R	E	A	G	E	K	I	A	.	.	M	L	T	S	Y	D	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	.	.	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R
Template Known Secondary structure														T	T					.	.						S										T	T		S						T	T					T	T			S	S	S	.	.	T	T																T			S
Template Predicted Secondary structure																				.	.																																						.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		72		.	.		.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure			.			.								.	.	.	.	.	.	.
Query SS confidence			.			.								.	.	.	.	.	.	.
Query Sequence		P	.	V	V	.	R	V	P	T	N	E	P	.	.	.	.	.	.	.	V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S
Query Conservation			.			.								.	.	.	.	.	.	.
Alig confidence			.			.								.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q	M	V	K	L	E	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	G	L	G	A	A	.	.	.	.	Q	L	L	R	D	A	R	A	V	E	E	A
Template Known Secondary structure		S								T	T	S		S	S														T	T		S								G	G	G										T	T													.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	N	I	T	I	L	V	Q	I	E	S	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S
Query Conservation
Alig confidence												.																.	.	.
Template Conservation												.																.	.	.
Template Sequence		G	A	Q	L	I	V	L	E	A	V	.	P	T	L	V	A	A	E	V	T	R	E	L	S	I	P	.	.	.	T	I	G	I	G	A	G
Template Known Secondary structure		T		S						S		.													S	S		.	.	.					S	S
Template Predicted Secondary structure												.																.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions