Job Description P23522 Confidence 97.84% Date Wed Jan 25 15:20:43 GMT 2012 Rank 54 Aligned Residues 208 % Identity 15% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		5	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.												50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure							.																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	P	N	K	.	F	K	A	A	L	A	A	K	Q	V	Q	I	G	C	W	S	A	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	D	G	E	.	.	.	.	.	.	.	.	.	.	.	H	A	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	S	A	S	A	P
Query Conservation							.																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.													.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		I	S	A	G	A	K	F	R	A	A	V	A	A	E	Q	P	L	Q	.	.	V	V	G	A	I	T	A	Y	A	A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	N	L	P
Template Known Secondary structure															S	S	S			.	.					S	S										T	T		S																S		S	S	S																				S
Template Predicted Secondary structure																				.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		73	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	R	V	P	T	N	E	P	V	.	.	.	.	.	.	.	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N
Query Conservation												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T		S	S	S														T	T		S							B						T	T							B															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	E	S	Q	.	.	.	.	.	.	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N
Query Conservation																											.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																		.	.	.	.	.	.													.								.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation		.	.	.	.	.	.	.	.																																				.								.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	.	G	A	D	M	I	F	P	.	.	.	.	.	.	.	.	.	.	.	E	A	M	K	T	L	D	D	Y	R	R	F	K	E	A	V	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.				S		T	T	S																												.	T		S					.	.	.	.	.	.	.	.	.	.	.					S												.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																				.								.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
										148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.												190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																			.
Query SS confidence																			.	.	.																			.
Query Sequence		R	A	S	A	H	G	K	P	S	G	I	L	A	P	V	E	A	.	.	.	D	A	R	R	Y	L	E	W	G	A	T	F	V	A	V	G	S	D	.	L	G	V	F	R	S	A	T	Q	K	L	A	D	T	F	K	K
Query Conservation																			.	.	.																			.
Alig confidence		.	.	.															.	.	.																			.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F	T	L	D	E	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y	R	A	M	N	K	A	A	L	N	F	Y	E	T	V	R	R
Template Known Secondary structure		.	.	.		S		B						T	T	S	S	S											T	T								S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions