Return to main results Retrieve Phyre Job Id

Job DescriptionP23522
Confidence56.33%DateWed Jan 25 15:20:43 GMT 2012
Rank303Aligned Residues114
% Identity16%Templatec3e96B_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 bacillus clausii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90......... 100.........110.........120.........130.........140.........150..
Predicted Secondary structure 





......





























..
Query SS confidence 


















. . . . . .




















































. .
Query Sequence  PVIIKRLLDIGFYNFLIPF. . . . . . VETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQI. .
Query Conservation     
   

 

 




 ......
 




   
 
  


 
 

                    
    

  
..
Alig confidence 


















......













.........................













..
Template Conservation     
  
   

 

 
 




   

  

  
    .........................         
      
Template Sequence  KETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRT. . . . . . . . . . . . . . . . . . . . . . . . . VEYVHGRALVVAGIGY
Template Known Secondary structure  TTT


TTSTTTTGGGS
.........................TTSS
S
Template Predicted Secondary structure 











.........................






Template SS confidence 















































































   36...40.........50.........60.........70.... .....80.........90
 
   153......160.........170.........180.........190.........200.........210...... ...220........
Predicted Secondary structure 





















....


Query SS confidence 































































. . . .











Query Sequence  ESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGIL. . . . APVEADARRYLE
Query Conservation 

  

 
  








 
 

  


  

       
 
  
   
  

   
   
  ....            
Alig confidence 














.








..........




























....











Template Conservation   
   
  
  
   .


 

  
..........
 
   
   
      
  
   

 

             
  
Template Sequence  ATSTAIELGNAAKAA. GADAVMIHM. . . . . . . . . . PIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAP
Template Known Secondary structure  S.T
S

..........


S



S


TTS
TTT
Template Predicted Secondary structure 

.




..........

















Template SS confidence 















































































   91........100..... ....110.... .....120.........130.........140.........150.........
 
   229230
Predicted Secondary structure 

Query SS confidence 

Query Sequence  WG
Query Conservation   
Alig confidence 

Template Conservation    
Template Sequence  LQ
Template Known Secondary structure 
T
Template Predicted Secondary structure 

Template SS confidence 

   160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions