Job Description P23522 Confidence 63.25% Date Wed Jan 25 15:20:43 GMT 2012 Rank 261 Aligned Residues 214 % Identity 15% Template c3e5bB_ PDB info PDB header:lyase Chain: B: PDB Molecule:isocitrate lyase; PDBTitle: 2.4 a crystal structure of isocitrate lyase from brucella2 melitensis Resolution 2.37 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	P	N	K	F	K	A	A	L	A	A	K	Q	V	Q	I	G	C	W	S	A	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	E	H	A	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	S	A
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		M	G	A	N	R	L	W	K	L	I	H	E	E	D	F	V	N	.	.	A	L	G	A	L	S	G	N	Q	A	M	Q	M	V	R	A	G	L	K	A	I	Y	L	S	G	W	Q	V	A	A	D	A	N	T	A	S	A	M	Y	P	D	Q	S	L	Y	P	A	N	A	G	P	E	L	A	K	R	I	N	R	T	L
Template Known Secondary structure														S	S				.	.			B		S	S										T	T		S															T	T		S				S	S	S		S		T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		70																				.	.	.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	V	V	R	V	P	T	N	E	P	.	.	.	.	.	.	.	V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	.	.	.	.	.	.	.	.	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																.	.
Template Conservation																																																																																.	.
Template Sequence		Q	R	A	D	Q	I	E	T	A	E	G	K	G	L	S	V	D	T	W	F	A	P	I	V	A	D	A	E	A	G	F	G	G	P	L	D	A	F	E	I	M	K	A	Y	I	E	A	G	A	A	G	V	H	F	E	D	Q	L	A	S	G	K	V	L	I	P	T	A	A	H	I	R	N	L	N	A	A	R	.	.
Template Known Secondary structure												T	S			S	S	S		S									T	T	T	T	S	S															T		S						S	B																						.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																																					.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	E	S	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	D
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	D	V	M	G	T	P	T	L	I	V	A	R	T	D	A	E	A	A	K	L	L	T	S	D	I	D	E	R	D	Q	P	F	V	D	Y	E	A	G	R	T	A	E	G	F	Y	Q	V	K	N	G	I	E	P	C	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T											T	T	T					S				S	T	T	T	G	G	G	B		T	T	S		B		T	T	S				B			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.													220	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	L	A	P	V	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	A	R	R	Y	L
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.											.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	I	A	Y	A	P	Y	.	.	C	D	L	I	W	M	E	T	S	K	.	.	.	.	.	.	.	.	.	.	.	P	D	L	A	Q	A	R	R	F	A	E	A	V	H	K	A	H	P	G	K	L	L	A	Y	N	C	S	P	S	F	N	W	K	K	N	L	D	D	A	T	I	A	K	F	Q	R	E	L	G
Template Known Secondary structure							G	G	G	.	.		S							S	S	.	.	.	.	.	.	.	.	.	.	.																	S	T	T									S	S	S						S
Template Predicted Secondary structure										.	.											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.												.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		228	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	W	G	A	T	F	V	A	V	G	.	S	D	L	G	V	F	R	S	A	T	Q	K	L	A	D	T	F	K	K
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		A	M	G	Y	K	F	Q	F	I	T	L	A	G	F	H	Q	L	N	Y	G	M	F	E	L	A	R	G	Y	K	D
Template Known Secondary structure			T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions