Job Description P23522 Confidence 94.90% Date Wed Jan 25 15:20:43 GMT 2012 Rank 101 Aligned Residues 184 % Identity 13% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																															.
Query SS confidence																							.	.	.	.	.	.																															.
Query Sequence		I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	D	G	E	H	A	.	.	.	.	.	.	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	S	A	S	A	P	V	V	R	V	P	T	N	E	P	.	V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	T	K
Query Conservation																							.	.	.	.	.	.																															.
Alig confidence																							.	.	.	.	.	.												.	.	.	.	.															.													.
Template Conservation																																								.	.	.	.	.																												.
Template Sequence		E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	.	.	.	.	T	H	C	F	K	D	V	H	L	X	V	R	N	Q	L	E	V	A	K	A	V	V	A	N	G	A	N	.	L	V	T	L	Q	L	E	Q	Y
Template Known Secondary structure										T	T										B	S	S	S	S	S		B		B		T					T	S		.	.	.	.	.	T	T	S									S												T	T		S	.						T	T		T
Template Predicted Secondary structure																																								.	.	.	.	.																												.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.
Query Sequence		E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	.	.	.	.	.	.	.	.	.	N	K	N	I	T	I	L	V	Q	I	E	S	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F
Query Conservation																																									.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.														.	.										.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.										.	.
Template Sequence		H	D	F	A	L	T	I	E	W	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	.	.	I	S	E	L	E	P	Y	L	D	.	.	Q	I	D	V	I	Q
Template Known Secondary structure		T	S									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						T	T													T	T	S		.	.	G	G	G	G	T	T	T	T	T	.	.	T		S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.										.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.																											.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.			.	.	.	150	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.												.	.
Query SS confidence																																													.	.	.												.	.
Query Sequence		V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	L	A	.	.	.	P	V	E	A	D	A	R	R	Y	L	E	.	.	W	G	A	T	F	V	A	V	G	S	D	L	G	V	F	R	S	A	T	Q	K
Query Conservation																																													.	.	.												.	.
Alig confidence			.	.	.	.																																							.	.	.												.	.											.	.
Template Conservation			.	.	.	.																																																																	.	.
Template Sequence		L	.	.	.	.	L	T	L	D	P	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	.	.	A	L	F	S	G	E	L	K	T
Template Known Secondary structure			.	.	.	.		S			T	T	T	T																				G	G	G	G	G	G							S	S												S	S	S									G	.	.	G	G	G	S	S
Template Predicted Secondary structure			.	.	.	.																																																																	.	.
Template SS confidence
		153					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.
		250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	T	F	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	K	V	W	K	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions